RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CSDE1O75534 798 aaKnown RBP13.05□□□□□ -0.32
LIN28A-201ENST00000254231 ZNF280AP59817 542 aaPredicted RBP13.05□□□□□ -0.32
LIN28A-201ENST00000254231 RAB34Q9BZG1 259 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 EFCC1Q9HA90 598 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 EXOC1Q9NV70 894 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 COL20A1Q9P218 1284 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 CPA4Q9UI42 421 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 MYO7AQ13402 2215 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 ARID5AQ03989 594 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 MTA3Q9BTC8 594 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 MRIQ9BWK5 157 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 UBASH3AP57075 661 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 FERMT2Q96AC1 680 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 SUGCTQ9HAC7 445 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 MATR3P43243 847 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIN28A-201ENST00000254231 DNA2P51530 1060 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
LIN28A-201ENST00000254231 PPP1R18Q6NYC8 613 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 SV2BQ7L1I2 683 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 ARMC9Q7Z3E5 817 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 GPBP1Q86WP2 473 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
LIN28A-201ENST00000254231 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
LIN28A-201ENST00000254231 ECM1Q16610 540 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 ANKS1AQ92625 1134 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 VTI1AQ96AJ9 217 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
LIN28A-201ENST00000254231 A0A1W2PQ27 194 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 A0A1W2PQ64 194 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 A0A1W2PQD8 194 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 DYDC2Q96IM9 177 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 FAM84AQ96KN4 292 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
LIN28A-201ENST00000254231 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 VWA5AO00534 786 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 CTAGE5O15320 804 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
LIN28A-201ENST00000254231 NPEPPSP55786 919 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 RREB1Q92766 1687 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 PRUNE2Q8WUY3 3088 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 EML1O00423 815 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 ATL3Q6DD88 541 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 SCLT1Q96NL6 688 aa13.03□□□□□ -0.32
LIN28A-201ENST00000254231 ROBO3Q96MS0 1386 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 CCL15-CCL14A0A0B4J2E2 113 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 IPO5O00410 1097 aaKnown RBP13.02□□□□□ -0.32
LIN28A-201ENST00000254231 CLIC2O15247 247 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 MSH4O15457 936 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 ATP9AO75110 1047 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 SLFN14P0C7P3 912 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 BMP6P22004 513 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 CCL15Q16663 113 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.32
LIN28A-201ENST00000254231 CDR2LQ86X02 465 aaPredicted RBP13.02□□□□□ -0.32
LIN28A-201ENST00000254231 PRRC2BQ5JSZ5 2229 aaKnown RBP13.02□□□□□ -0.33
LIN28A-201ENST00000254231 IQCA1LA6NCM1 817 aa13.02□□□□□ -0.33
LIN28A-201ENST00000254231 RPN1P04843 607 aaKnown RBP13.02□□□□□ -0.33
LIN28A-201ENST00000254231 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.33
LIN28A-201ENST00000254231 MTMR1Q13613 665 aa13.02□□□□□ -0.33
LIN28A-201ENST00000254231 PRAMEF19Q5SWL8 479 aa13.02□□□□□ -0.33
LIN28A-201ENST00000254231 ANKRD13AQ8IZ07 590 aa13.02□□□□□ -0.33
LIN28A-201ENST00000254231 MKL1Q969V6 931 aa13.02□□□□□ -0.33
LIN28A-201ENST00000254231 CCDC47Q96A33 483 aaKnown RBP13.02□□□□□ -0.33
LIN28A-201ENST00000254231 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 N4BP3O15049 544 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
LIN28A-201ENST00000254231 ADKP55263 362 aaKnown RBP13.01□□□□□ -0.33
LIN28A-201ENST00000254231 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 CYFIP1Q7L576 1253 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 DDX12PQ92771 950 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 GMCL1Q96IK5 515 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 SRRTQ9BXP5 876 aaKnown RBP13.01□□□□□ -0.33
LIN28A-201ENST00000254231 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 MED24O75448 989 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 USP14P54578 494 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 NLRP12P59046 1061 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 CCDC173Q0VFZ6 552 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 STK4Q13043 487 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 PTPROQ16827 1216 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 MYCT1Q8N699 235 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 C2orf69Q8N8R5 385 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 HAS1Q92839 578 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 SNCAIPQ9Y6H5 919 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 OPLAHO14841 1288 aa13.01□□□□□ -0.33
LIN28A-201ENST00000254231 WDR46O15213 610 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms