RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 RBBP6Q7Z6E9 1792 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 BICDL2A1A5D9 508 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 MYMKA6NI61 221 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 PDE4DQ08499 809 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 IKQ13123 557 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 AMOTL1Q8IY63 956 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 ZNF444Q8N0Y2 327 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 SH3RF3Q8TEJ3 882 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 IQCDQ96DY2 449 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 GDF3Q9NR23 364 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 MACROD2A1Z1Q3 448 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 MOCS3O95396 460 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 MYBP10242 640 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 PPP4CP60510 307 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 SKOR1P84550 965 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 DYMQ7RTS9 669 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 NOC4LQ9BVI4 516 aaKnown RBP13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 KANSL2Q9H9L4 492 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 EFCC1Q9HA90 598 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 BTAF1O14981 1849 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.28
SEC61A1-201ENST00000243253 UBA7P41226 1012 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 ARID5AQ03989 594 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 NFIXQ14938 502 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 ECM1Q16610 540 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 TANGO6Q9C0B7 1094 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 PCDHA2Q9Y5H9 948 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 USP17L2Q6R6M4 530 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 ZC3H3Q8IXZ2 948 aaKnown RBP13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 SIPA1L1O43166 1804 aa13.27□□□□□ -0.29
SEC61A1-201ENST00000243253 LRRC53A6NM62 1247 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 RFC4P35249 363 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 KIAA1328Q86T90 577 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 IQCKQ8N0W5 287 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 NUDT12Q9BQG2 462 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 TMEM59LQ9UK28 342 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 SMARCA1P28370 1054 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 EIF4A3P38919 411 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 ORC2Q13416 577 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 TMEM119Q4V9L6 283 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 HSP90B2PQ58FF3 399 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 PPP1R2P41236 205 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 TNNT3P45378 269 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 SCNN1DP51172 638 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 CACNB3P54284 484 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 MEX3CQ5U5Q3 659 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 IFIH1Q9BYX4 1025 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 ACBD3Q9H3P7 528 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 C10orf71Q711Q0 1435 aa13.26□□□□□ -0.29
SEC61A1-201ENST00000243253 PVALEFA0A1B0GWK0 134 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 ECHS1P30084 290 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 KIF5AQ12840 1032 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 UNC13DQ70J99 1090 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 GUF1Q8N442 669 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 ARL8AQ96BM9 186 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 DNAJC19Q96DA6 116 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 RBM12Q9NTZ6 932 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 CCNL1Q9UK58 526 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 ESYT2A0FGR8 921 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 EIF3HO15372 352 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 SLC37A4O43826 429 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 CLSTN1O94985 981 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 TECP42680 631 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 PDXDC1Q6P996 788 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 FAM114A1Q8IWE2 563 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 CCDC155Q8N6L0 562 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 ANKRD13CQ8N6S4 541 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 KAT2BQ92831 832 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 RTFDC1Q9BY42 306 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 RIOX1Q9H6W3 641 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 SLC39A2Q9NP94 309 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 ADAMTSL1Q8N6G6 1762 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 SSU72P8A0A1W2PR75 194 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 GOLGA6BA6NDN3 693 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 NCK2O43639 380 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 CCNT1O60563 726 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 GLI1P08151 1106 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 TXKP42681 527 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 NAPAP54920 295 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms