RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 PTPREP23469 700 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 GNA11P29992 359 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 BMP8BP34820 402 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 STAT2P52630 851 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 GRB14Q14449 540 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 EGFLAMQ63HQ2 1017 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 BARHL2Q9NY43 387 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 GABRQQ9UN88 632 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 MTMR6Q9Y217 621 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 GNEQ9Y223 722 aaKnown RBP10.6□□□□□ -0.71
TGFB3-201ENST00000238682 MYH15Q9Y2K3 1946 aa10.6□□□□□ -0.71
TGFB3-201ENST00000238682 ATP2A1O14983 1001 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 ZBTB5O15062 677 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 BMP15O95972 392 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 TRAPPC10P48553 1259 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 GHRHRQ02643 423 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 SYDE2Q5VT97 1194 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 GPR142Q7Z601 462 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 RANBP17Q9H2T7 1088 aaKnown RBP10.59□□□□□ -0.71
TGFB3-201ENST00000238682 NCOA5Q9HCD5 579 aaKnown RBP10.59□□□□□ -0.71
TGFB3-201ENST00000238682 RBPJLQ9UBG7 517 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 TULP2O00295 520 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 F13A1P00488 732 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 CCDC96Q2M329 555 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 HABP4Q5JVS0 413 aaKnown RBP10.59□□□□□ -0.71
TGFB3-201ENST00000238682 ZSCAN30Q86W11 494 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 NPAS4Q8IUM7 802 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 LRRC47Q8N1G4 583 aaKnown RBP10.59□□□□□ -0.71
TGFB3-201ENST00000238682 PRPF38AQ8NAV1 312 aaKnown RBP10.59□□□□□ -0.71
TGFB3-201ENST00000238682 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
TGFB3-201ENST00000238682 PHF20Q9BVI0 1012 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 SEZ6LQ9BYH1 1024 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 ABCB11O95342 1321 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
TGFB3-201ENST00000238682 A0A1W2PRG0 241 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 FAM196BA6NMK8 535 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 PRPF40AO75400 957 aaKnown RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 IGHA2P01877 340 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 TFRCP02786 760 aaKnown RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 MMP1P03956 469 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 U2AF2P26368 475 aaKnown RBP eCLIP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 DSG3P32926 999 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 PKN1Q16512 942 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 SKOR2Q2VWA4 1001 aaPredicted RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 MYCBPQ99417 103 aaPredicted RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 RPAP3Q9H6T3 665 aaPredicted RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 C6orf50Q9HD87 102 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 ADAMTS5Q9UNA0 930 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 CEP350Q5VT06 3117 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 ZSWIM8A7E2V4 1837 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 PLXNB2O15031 1838 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 JAK2O60674 1132 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 CNMDO75829 334 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 JAG1P78504 1218 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 GABPB1Q06547 395 aaPredicted RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 TIGD1Q96MW7 591 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 ZMYND12Q9H0C1 365 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 C11orf49Q9H6J7 331 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 CFAP45Q9UL16 551 aa10.58□□□□□ -0.72
TGFB3-201ENST00000238682 G3BP2Q9UN86 482 aaKnown RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 DDX49Q9Y6V7 483 aaKnown RBP10.58□□□□□ -0.72
TGFB3-201ENST00000238682 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
TGFB3-201ENST00000238682 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 SLF1Q9BQI6 1058 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 AMNQ9BXJ7 453 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 V9GY48 417 aaPredicted RBP10.57□□□□□ -0.72
TGFB3-201ENST00000238682 KRT2P35908 639 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 ATP2B2Q01814 1243 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 RESTQ13127 1097 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 KRT40Q6A162 431 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 RIOX2Q8IUF8 465 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 JMJD4Q9H9V9 463 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 LMBRD1Q9NUN5 540 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 CALCOCO1Q9P1Z2 691 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 FBXO40Q9UH90 709 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 PPP1R9AQ9ULJ8 1098 aa10.57□□□□□ -0.72
TGFB3-201ENST00000238682 STXBP3O00186 592 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 PIK3CDO00329 1044 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 KIF1CO43896 1103 aaKnown RBP10.56□□□□□ -0.72
TGFB3-201ENST00000238682 ZBED4O75132 1171 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 FOSP01100 380 aaPredicted RBP10.56□□□□□ -0.72
TGFB3-201ENST00000238682 MRPL12P52815 198 aaKnown RBP10.56□□□□□ -0.72
TGFB3-201ENST00000238682 AP3B2Q13367 1082 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 TCEAL1Q15170 157 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 MTFR1Q15390 333 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 CCDC144BQ3MJ40 725 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 ZFYVE27Q5T4F4 411 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 BANK1Q8NDB2 785 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 ACER1Q8TDN7 264 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 SCAND2PQ9GZW5 306 aaPredicted RBP10.56□□□□□ -0.72
TGFB3-201ENST00000238682 EHMT1Q9H9B1 1298 aa10.56□□□□□ -0.72
TGFB3-201ENST00000238682 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
TGFB3-201ENST00000238682 PCDHA4Q9UN74 947 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms