RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ARHGEF16Q5VV41 709 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 HEATR3Q7Z4Q2 680 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 TLK2Q86UE8 772 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 CRYGNQ8WXF5 182 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 PSTPIP2Q9H939 334 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 TMEM260Q9NX78 707 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 NAP1L2Q9ULW6 460 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-201ENST00000230480 RBAK-RBAKDNI3L0D1 243 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 ASGR1P07306 291 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 C6orf222P0C671 652 aaPredicted RBP15.81■□□□□ 0.12
VEGFA-201ENST00000230480 SCG2P13521 617 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 FGD1P98174 961 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 STK3Q13188 491 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 STXBP2Q15833 593 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 SLC43A3Q8NBI5 491 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 DPF3Q92784 378 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 PGBD1Q96JS3 809 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 INPP4AQ96PE3 977 aaPredicted RBP15.81■□□□□ 0.12
VEGFA-201ENST00000230480 RIC8AQ9NPQ8 531 aa15.81■□□□□ 0.12
VEGFA-201ENST00000230480 SEC63Q9UGP8 760 aaKnown RBP15.81■□□□□ 0.12
VEGFA-201ENST00000230480 LTBP2Q14767 1821 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 A6NJR5 290 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-201ENST00000230480 TXNP10599 105 aaKnown RBP15.8■□□□□ 0.12
VEGFA-201ENST00000230480 MYCLP12524 364 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-201ENST00000230480 ITGB8P26012 769 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 NEK4P51957 841 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 TRAF1Q13077 416 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 GNASQ5JWF2 1037 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 SH3RF1Q7Z6J0 888 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 RNF180Q86T96 592 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 NECAB1Q8N987 351 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 SCFD2Q8WU76 684 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 HTATIP2Q9BUP3 242 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 RNF26Q9BY78 433 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-201ENST00000230480 ZMYND12Q9H0C1 365 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 GJB4Q9NTQ9 266 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
VEGFA-201ENST00000230480 TRIP12Q14669 1992 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-201ENST00000230480 CCDC196A0A1B0GTZ2 297 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 SMCO2A6NFE2 343 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 SPATA31C2B4DYI2 1134 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 M0R2N6 131 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 ITGB5P18084 799 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 ICAM3P32942 547 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 RTP1P59025 263 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 FSCN1Q16658 493 aaKnown RBP15.79■□□□□ 0.12
VEGFA-201ENST00000230480 TRIM60Q495X7 471 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 CXCL17Q6UXB2 119 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 CYP2W1Q8TAV3 490 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 PPP1R13LQ8WUF5 828 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 SLC26A6Q9BXS9 759 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 RTEL1Q9NZ71 1219 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 UBIAD1Q9Y5Z9 338 aa15.79■□□□□ 0.12
VEGFA-201ENST00000230480 ESYT2A0FGR8 921 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 MOXD2PA6NHM9 499 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 KBTBD13C9JR72 458 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 ATP9AO75110 1047 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
VEGFA-201ENST00000230480 NAPAP54920 295 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 PURAQ00577 322 aaKnown RBP15.78■□□□□ 0.12
VEGFA-201ENST00000230480 TLE2Q04725 743 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 MYSM1Q5VVJ2 828 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 PCNX4Q63HM2 1172 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 C7orf61Q8IZ16 206 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 SMARCC2Q8TAQ2 1214 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 KAT2BQ92831 832 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 C22orf23Q9BZE7 217 aa15.78■□□□□ 0.12
VEGFA-201ENST00000230480 TRIM43BA6NCK2 446 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 hCG_1984214I3L0E3 225 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 EVI5O60447 810 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 HOXD8P13378 290 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-201ENST00000230480 SYN1P17600 705 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 UBA1P22314 1058 aaKnown RBP15.77■□□□□ 0.12
VEGFA-201ENST00000230480 PSMC6P62333 389 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 TTLL4Q14679 1199 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 ZNF713Q8N859 430 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-201ENST00000230480 RASGRP4Q8TDF6 673 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 AFG1LQ8WV93 481 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 EMID1Q96A84 441 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-201ENST00000230480 TRIM43Q96BQ3 446 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-201ENST00000230480 CTAGE1Q96RT6 745 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 VPS54Q9P1Q0 977 aa15.77■□□□□ 0.12
VEGFA-201ENST00000230480 ZMYND8Q9ULU4 1186 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-201ENST00000230480 ELP1O95163 1332 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 NKRFO15226 690 aaKnown RBP eCLIP15.76■□□□□ 0.111e-6■□□□□ 9.3
VEGFA-201ENST00000230480 CCND2P30279 289 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 FAAP100Q0VG06 881 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 NOL8Q76FK4 1167 aaKnown RBP15.76■□□□□ 0.11
VEGFA-201ENST00000230480 ANKRD33Q7Z3H0 272 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 OR6J1Q8NGC5 347 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 GDF15Q99988 308 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 PDLIM7Q9NR12 457 aa15.76■□□□□ 0.11
VEGFA-201ENST00000230480 B4DLN1 442 aa15.75■□□□□ 0.11
VEGFA-201ENST00000230480 SORBS3O60504 671 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms