RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 JAKMIP2Q96AA8 810 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 CNOT6LQ96LI5 555 aaKnown RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 GPR101Q96P66 508 aaPredicted RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 EXOC1Q9NV70 894 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 MAGEC2Q9UBF1 373 aaPredicted RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 FLT1P17948 1338 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 MYH10P35580 1976 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 TECP42680 631 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 GRM4Q14833 912 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 MIIPQ5JXC2 388 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 CEP85LQ5SZL2 805 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 WDR93Q6P2C0 686 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 PTF1AQ7RTS3 328 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 CABP7Q86V35 215 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 DGKHQ86XP1 1220 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 CAPS2Q9BXY5 557 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 CCSER1Q9C0I3 900 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 MED4Q9NPJ6 270 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 EPHB6O15197 1021 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 CCNT1O60563 726 aaKnown RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 SYF2O95926 243 aaKnown RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 TSPY3P0CV98 308 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 TSPY8P0CW00 308 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 MEA1Q16626 185 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 PAPD7Q5XG87 772 aaKnown RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 TGFBRAP1Q8WUH2 860 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 TMEM47Q9BQJ4 181 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 TRIM9Q9C026 710 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 VAT1LQ9HCJ6 419 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 SH3GLB2Q9NR46 395 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 BARHL2Q9NY43 387 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 FOCADQ5VW36 1801 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 MTIF2P46199 727 aaKnown RBP10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 ASIC1P78348 528 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 CLEC4GQ6UXB4 293 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 SND1Q7KZF4 910 aaKnown RBP eCLIP10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 EGFL6Q8IUX8 553 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 P2RX5Q93086 422 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 SGSM3Q96HU1 749 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 CCDC114Q96M63 670 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 PSMB7Q99436 277 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 SLC39A2Q9NP94 309 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 GOLGA6BA6NDN3 693 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 POTEDQ86YR6 584 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 AKT1S1Q96B36 256 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 TBC1D31Q96DN5 1066 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 NOC4LQ9BVI4 516 aaKnown RBP10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 JADE2Q9NQC1 790 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 BCCIPQ9P287 314 aaKnown RBP eCLIP10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 LRWD1Q9UFC0 647 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 IDEP14735 1019 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 CCNE1P24864 410 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 C2orf54Q08AI8 447 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 USP17L2Q6R6M4 530 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 MAPKAPK5Q8IW41 473 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 KIAA0895Q8NCT3 520 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 SEMA6BQ9H3T3 888 aa10.42□□□□□ -0.74
HLA-DOA-201ENST00000229829 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 KRT86O43790 486 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 IRAK1P51617 712 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 TUBB4BP68371 445 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 KRT83P78385 493 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 IFT88Q13099 833 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 HDAC7Q8WUI4 952 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 NLRP3Q96P20 1036 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 MMTAG2Q9BU76 263 aaKnown RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 SMARCAL1Q9NZC9 954 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 ZC3H4Q9UPT8 1303 aaKnown RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 PALM3A6NDB9 673 aaPredicted RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 NAPAP54920 295 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 ZNF444Q8N0Y2 327 aaPredicted RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 MLXIPQ9HAP2 919 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 TCP11L1Q9NUJ3 509 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 CAPN6Q9Y6Q1 641 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 SMCO2A6NFE2 343 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 OR52Z1P0C646 297 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 CYLC1P35663 651 aaPredicted RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 GSCP56915 257 aaPredicted RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 ZBED6P86452 979 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 AMIGO3Q86WK7 504 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 MSL3Q8N5Y2 521 aaKnown RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 FAM207AQ9NSI2 230 aaPredicted RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 EHD2Q9NZN4 543 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 BIN2Q9UBW5 565 aaPredicted RBP10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 HPCAL4Q9UM19 191 aa10.41□□□□□ -0.74
HLA-DOA-201ENST00000229829 RASA1P20936 1047 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 CXCR5P32302 372 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 TXKP42681 527 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 SLC10A5Q5PT55 438 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 DYMQ7RTS9 669 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 NBPF5PQ86XG9 351 aaPredicted RBP10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 SH2D3CQ8N5H7 860 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 GLIS3Q8NEA6 775 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 COG1Q8WTW3 980 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms