RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SPECC1LQ69YQ0 1117 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 ARL8AQ96BM9 186 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 DCP1AQ9NPI6 582 aaPredicted RBP15.05■□□□□ -0
GABPB1-201ENST00000220429 TPD52L2O43399 206 aaKnown RBP15.04■□□□□ -0
GABPB1-201ENST00000220429 PPP1R37O75864 691 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 RFC4P35249 363 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 SCTRP47872 440 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 GUCY1A3Q02108 690 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 SHISA4Q96DD7 197 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 LZTS2Q9BRK4 669 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 FOXP1Q9H334 677 aaPredicted RBP15.04■□□□□ -0
GABPB1-201ENST00000220429 ZFATQ9P243 1243 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.04■□□□□ -0
GABPB1-201ENST00000220429 GOLGA6L10A6NI86 522 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 CTCFP49711 727 aaPredicted RBP15.04■□□□□ -0
GABPB1-201ENST00000220429 SEC24CP53992 1094 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 AMPD2Q01433 879 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 NR5A1Q13285 461 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 IFIT1BQ5T764 474 aaKnown RBP15.04■□□□□ -0
GABPB1-201ENST00000220429 RNF26Q9BY78 433 aaPredicted RBP15.04■□□□□ -0
GABPB1-201ENST00000220429 IQCGQ9H095 443 aaKnown RBP15.04■□□□□ -0
GABPB1-201ENST00000220429 FAM184BQ9ULE4 1060 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 SPATA31A6Q5VVP1 1343 aa15.04■□□□□ -0
GABPB1-201ENST00000220429 PCP11498 1178 aaKnown RBP15.03■□□□□ -0
GABPB1-201ENST00000220429 FUT2Q10981 343 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 NFIXQ14938 502 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 PPP2R5BQ15173 497 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 MSL1Q68DK7 614 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 FAM196AQ6ZSG2 479 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 KIAA0825Q8IV33 1275 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 CCHCR1Q8TD31 782 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 OXER1Q8TDS5 423 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 RNPC3Q96LT9 517 aaKnown RBP15.03■□□□□ -0
GABPB1-201ENST00000220429 CRNKL1Q9BZJ0 848 aaKnown RBP15.03■□□□□ -0
GABPB1-201ENST00000220429 MAGEA10P43363 369 aaPredicted RBP15.03■□□□□ -0
GABPB1-201ENST00000220429 RASA3Q14644 834 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 RAD9BQ6WBX8 426 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 KDM7AQ6ZMT4 941 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
GABPB1-201ENST00000220429 RUFY1Q96T51 708 aa15.03■□□□□ -0
GABPB1-201ENST00000220429 DNAAF2Q9NVR5 837 aaKnown RBP15.03■□□□□ -0
GABPB1-201ENST00000220429 TROAPQ12815 778 aa15.02■□□□□ -0
GABPB1-201ENST00000220429 SFSWAPQ12872 951 aaKnown RBP15.02■□□□□ -0
GABPB1-201ENST00000220429 PKN1Q16512 942 aa15.02■□□□□ -0
GABPB1-201ENST00000220429 AENQ8WTP8 325 aaKnown RBP15.02■□□□□ -0
GABPB1-201ENST00000220429 NOP53Q9NZM5 478 aaKnown RBP15.02■□□□□ -0
GABPB1-201ENST00000220429 DNAJC8O75937 253 aaPredicted RBP15.02□□□□□ -0.01
GABPB1-201ENST00000220429 PLEKHA8P1O95397 391 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 CYP2D6P10635 497 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 MFSD4BQ5TF39 518 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 SND1Q7KZF4 910 aaKnown RBP eCLIP15.02□□□□□ -0.01
GABPB1-201ENST00000220429 CATIPQ7Z7H3 387 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 KRI1Q8N9T8 703 aaKnown RBP15.02□□□□□ -0.01
GABPB1-201ENST00000220429 RANBP17Q9H2T7 1088 aaKnown RBP15.02□□□□□ -0.01
GABPB1-201ENST00000220429 LRRC4BQ9NT99 713 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 ATP8A2Q9NTI2 1148 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 SLC5A4Q9NY91 659 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 L3MBTL1Q9Y468 752 aa15.02□□□□□ -0.01
GABPB1-201ENST00000220429 ORC4O43929 436 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 LUC7L3O95232 432 aaKnown RBP15.01□□□□□ -0.01
GABPB1-201ENST00000220429 GRAPQ13588 217 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 LACTB2Q53H82 288 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-201ENST00000220429 RILPL1Q5EBL4 403 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 PPP1R15BQ5SWA1 713 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 SH2D3CQ8N5H7 860 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 GRAPLQ8TC17 118 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-201ENST00000220429 CYFIP2Q96F07 1278 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 TUBE1Q9UJT0 475 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 UBR3Q6ZT12 1888 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 hCG_1642624A0A1W2PR95 340 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 E7EVH7 732 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 NMT2O60551 498 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 ATP6V1G1O75348 118 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 GRIN1Q05586 938 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 RASGRP2Q7LDG7 609 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 EHBP1Q8NDI1 1231 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 PANX2Q96RD6 677 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 ANKIB1Q9P2G1 1089 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 PCDHB6Q9Y5E3 794 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 NNTQ13423 1086 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 FAM47AQ5JRC9 791 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 NUGGCQ68CJ6 796 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 HIBCHQ6NVY1 386 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-201ENST00000220429 CNBD1Q8NA66 436 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 MIPOL1Q8TD10 442 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 DTNBP1Q96EV8 351 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 VPS54Q9P1Q0 977 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 FBXO2Q9UK22 296 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-201ENST00000220429 KCNH3Q9ULD8 1083 aa15.01□□□□□ -0.01
GABPB1-201ENST00000220429 SRRM3A6NNA2 597 aaPredicted RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 PDLIM1O00151 329 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 PRPF3O43395 683 aaKnown RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 DIAPH2O60879 1101 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 PNOCQ13519 176 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 LONRF3Q496Y0 759 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 SBK1Q52WX2 424 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 ALS2CLQ60I27 953 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 KCTD16Q68DU8 428 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 METTL16Q86W50 562 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms