RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 DAAM2Q86T65 1068 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 EPHB6O15197 1021 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 BUB1BO60566 1050 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 ALS2CLQ60I27 953 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 NLRP14Q86W24 1093 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 GPR101Q96P66 508 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 CCT8L2Q96SF2 557 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 TACO1Q9BSH4 297 aaKnown RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 ARHGAP20Q9P2F6 1191 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 ODF2LQ9ULJ1 636 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 TRADDQ15628 312 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 ASIC2Q16515 512 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 PFKFB3Q16875 520 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 HAUS3Q68CZ6 603 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 MGARPQ8TDB4 240 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
ACTN1-201ENST00000193403 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
ACTN1-201ENST00000193403 POTEMA6NI47 508 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 RPS6KA5O75582 802 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 PPP1R37O75864 691 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 CLTAP09496 248 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 ABCB4P21439 1286 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 PRDX5P30044 214 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 HERC4Q5GLZ8 1057 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-201ENST00000193403 CREG2Q8IUH2 290 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 CACNA2D3Q8IZS8 1091 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 SHISA4Q96DD7 197 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 RAB34Q9BZG1 259 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 ZNF652Q9Y2D9 606 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 KRIT1O00522 736 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 SEC23AQ15436 765 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-201ENST00000193403 CARD10Q9BWT7 1032 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-201ENST00000193403 EIF4E1BA6NMX2 242 aaKnown RBP12.31□□□□□ -0.44
ACTN1-201ENST00000193403 KLRF2D3W0D1 207 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 ZNF76P36508 570 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 MAP2K1Q02750 393 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-201ENST00000193403 PLS1Q14651 629 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 CALCRLQ16602 461 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 MAN2A1Q16706 1144 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 TTI2Q6NXR4 508 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 GJA10Q969M2 543 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 MTMR8Q96EF0 704 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 TCEAL9Q9UHQ7 104 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 ATP8A1Q9Y2Q0 1164 aa12.31□□□□□ -0.44
ACTN1-201ENST00000193403 NEBLO76041 1014 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 USP17L2Q6R6M4 530 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 TBCKQ8TEA7 893 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 AENQ8WTP8 325 aaKnown RBP12.3□□□□□ -0.44
ACTN1-201ENST00000193403 TGFBRAP1Q8WUH2 860 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 PPP1R12BO60237 982 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-201ENST00000193403 GNAQP50148 359 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 PEX26Q7Z412 305 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 HAUS2Q9NVX0 235 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 RGPD2P0DJD1 1756 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 SLCO1A2P46721 670 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
ACTN1-201ENST00000193403 EP400NLQ6ZTU2 488 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 GGT7Q9UJ14 662 aa12.3□□□□□ -0.44
ACTN1-201ENST00000193403 LRRC10BA6NIK2 292 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 ZNF263O14978 683 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 NKRFO15226 690 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■□□□ 13.9
ACTN1-201ENST00000193403 SNCBQ16143 134 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 HIBCHQ6NVY1 386 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-201ENST00000193403 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 GIMAP8Q8ND71 665 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-201ENST00000193403 LRRC45Q96CN5 670 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 DUSP9Q99956 384 aaKnown RBP12.29□□□□□ -0.44
ACTN1-201ENST00000193403 KLC4Q9NSK0 619 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 LTN1O94822 1766 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 MYH8P13535 1937 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 NEK8Q86SG6 692 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 REXO1Q8N1G1 1221 aaKnown RBP12.29□□□□□ -0.44
ACTN1-201ENST00000193403 MMGT1Q8N4V1 131 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 ATP6V1G3Q96LB4 118 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 PHF20L1A8MW92 1017 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 RAD51CO43502 376 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 KLRC1P26715 233 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 GNA11P29992 359 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 DHX9Q08211 1270 aaKnown RBP12.29□□□□□ -0.44
ACTN1-201ENST00000193403 FAM133BQ5BKY9 247 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms