RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 BSDC1Q9NW68 430 aaPredicted RBP11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 BARHL2Q9NY43 387 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 KRT14P02533 472 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 NONOQ15233 471 aaKnown RBP eCLIP11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 LRRC41Q15345 812 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 DGKHQ86XP1 1220 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 CEP120Q8N960 986 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 SIK3Q9Y2K2 1263 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 COL4A1P02462 1669 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 ITGB4P16144 1822 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 STRCP1A6NGW2 1772 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 ZSCAN5CA6NGD5 496 aaPredicted RBP11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 LAD1O00515 517 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 NDUFAB1O14561 156 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 HIBADHP31937 336 aaKnown RBP11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 SLC1A4P43007 532 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 GUCY2FP51841 1108 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 SV2BQ7L1I2 683 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 ZNF444Q8N0Y2 327 aaPredicted RBP11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 CDK5RAP3Q96JB5 506 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 AK8Q96MA6 479 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 CCDC43Q96MW1 224 aaKnown RBP11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 ZIM3Q96PE6 472 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 NFU1Q9UMS0 254 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 GRIN2DO15399 1336 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 PRPHP41219 470 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 CARSP49589 748 aaKnown RBP11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 MAN2A1Q16706 1144 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 EMBQ6PCB8 327 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 GBP6Q6ZN66 633 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 RPAINQ86UA6 219 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 NOX5Q96PH1 765 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 BIN2Q9UBW5 565 aaPredicted RBP11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 LOC102724428A0A0B4J2F2 783 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 KLRF2D3W0D1 207 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 KIF1CO43896 1103 aaKnown RBP11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 SIK1P57059 783 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 GUCY2DQ02846 1103 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 ARID5AQ03989 594 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 BIRC2Q13490 618 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 ITPK1Q13572 414 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 DDB1Q16531 1140 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 SBK1Q52WX2 424 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 TLR10Q9BXR5 811 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 EPB41L5Q9HCM4 733 aa11.63□□□□□ -0.55
CX3CL1-201ENST00000006053 MYMKA6NI61 221 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 FTCDO95954 541 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 PRLRP16471 622 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 INPP5BP32019 993 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 NNTQ13423 1086 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 CFAP58Q5T655 872 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 SOGA3Q5TF21 947 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 FBXW10Q5XX13 1052 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 CENPPQ6IPU0 288 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 TBCKQ8TEA7 893 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 SH3GL2Q99962 352 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 TMEM47Q9BQJ4 181 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 SAP30BPQ9UHR5 308 aaKnown RBP11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 HEXIM1O94992 359 aaKnown RBP11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 GLI1P08151 1106 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 FAM153BP0C7A2 387 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 HNRNPH3P31942 346 aaKnown RBP11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 PPP1R2P41236 205 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 FAM153CQ494X1 144 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 CFAP221Q4G0U5 840 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 ALS2CLQ60I27 953 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 MCTP2Q6DN12 878 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 KRT25Q7Z3Z0 450 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 CCDC84Q86UT8 332 aaPredicted RBP11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 DAGLBQ8NCG7 672 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 KAT2BQ92831 832 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 MMTAG2Q9BU76 263 aaKnown RBP11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 FAM153AQ9UHL3 310 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 PACSIN2Q9UNF0 486 aaPredicted RBP11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 C12orf60Q5U649 245 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 KLHDC7AQ5VTJ3 777 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 IFT20Q8IY31 132 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 C6orf50Q9HD87 102 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 ZNF652Q9Y2D9 606 aa11.62□□□□□ -0.55
CX3CL1-201ENST00000006053 KCNQ2O43526 872 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 MNAT1P51948 309 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 ITIH3Q06033 890 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 MMS22LQ6ZRQ5 1243 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 TGFBRAP1Q8WUH2 860 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 TMEM260Q9NX78 707 aa11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
CX3CL1-201ENST00000006053 CPP00450 1065 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms