RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 DAGLBQ8NCG7 672 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 PPM1EQ8WY54 764 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 ZIM3Q96PE6 472 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 EFCC1Q9HA90 598 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
USH1C-201ENST00000005226 FAM169AQ9Y6X4 670 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 GRIN2DO15399 1336 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 SLC37A4O43826 429 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 TDP2O95551 362 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 C8orf74Q6P047 294 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 CALML4Q96GE6 196 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 ZMYND12Q9H0C1 365 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 ZEB2O60315 1214 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 RASA1P20936 1047 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 HNRNPH3P31942 346 aaKnown RBP15.54■□□□□ 0.08
USH1C-201ENST00000005226 PAFAH1B1P43034 410 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 KCNMA1Q12791 1236 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 DDB1Q16531 1140 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 COA7Q96BR5 231 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 EPB41L5Q9HCM4 733 aa15.54■□□□□ 0.08
USH1C-201ENST00000005226 LAD1O00515 517 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 AMPD3Q01432 767 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 GUCY2DQ02846 1103 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 MAN2A1Q16706 1144 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 TADA2BQ86TJ2 420 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 IPO4Q8TEX9 1081 aaKnown RBP15.53■□□□□ 0.08
USH1C-201ENST00000005226 KAT2BQ92831 832 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 AK8Q96MA6 479 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 ALS2CR12Q96Q35 445 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 FGFBP2Q9BYJ0 223 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 CUEDC2Q9H467 287 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 FRMPD2Q68DX3 1309 aaPredicted RBP15.53■□□□□ 0.08
USH1C-201ENST00000005226 PHLPP1O60346 1717 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 EBAG9O00559 213 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 TCP1P17987 556 aaKnown RBP15.53■□□□□ 0.08
USH1C-201ENST00000005226 KRT25Q7Z3Z0 450 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 CCDC43Q96MW1 224 aaKnown RBP15.53■□□□□ 0.08
USH1C-201ENST00000005226 SH3GL2Q99962 352 aa15.53■□□□□ 0.08
USH1C-201ENST00000005226 EIF3HO15372 352 aaKnown RBP eCLIP15.52■□□□□ 0.08
USH1C-201ENST00000005226 TLR2O60603 784 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 HSF2BPO75031 334 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 PALMO75781 387 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
USH1C-201ENST00000005226 ECM1Q16610 540 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 SOGA3Q5TF21 947 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 HGSNATQ68CP4 663 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 PDXDC1Q6P996 788 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 ANKS1AQ92625 1134 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 RUFY1Q96T51 708 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 C6orf50Q9HD87 102 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 FAM170AA1A519 330 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 USP17L5A8MUK1 530 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 EDIL3O43854 480 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 SSBP05455 408 aaKnown RBP eCLIP15.52■□□□□ 0.08
USH1C-201ENST00000005226 LDHBP07195 334 aaKnown RBP15.52■□□□□ 0.08
USH1C-201ENST00000005226 EPHB4P54760 987 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 ASTE1Q2TB18 679 aaPredicted RBP15.52■□□□□ 0.08
USH1C-201ENST00000005226 FBXW10Q5XX13 1052 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 ICE2Q659A1 982 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 LRRC55Q6ZSA7 311 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 EFCAB13Q8IY85 973 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 LINC00116Q8NCU8 138 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 LARP4BQ92615 738 aaKnown RBP15.52■□□□□ 0.08
USH1C-201ENST00000005226 DDX12PQ92771 950 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 CDK5RAP3Q96JB5 506 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 PACSIN1Q9BY11 444 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 GOLPH3Q9H4A6 298 aa15.52■□□□□ 0.08
USH1C-201ENST00000005226 A0A087WUV0 522 aaPredicted RBP15.52■□□□□ 0.07
USH1C-201ENST00000005226 GOLGA8KD6RF30 607 aa15.52■□□□□ 0.07
USH1C-201ENST00000005226 GTF2A1P52655 376 aaPredicted RBP15.52■□□□□ 0.07
USH1C-201ENST00000005226 NNTQ13423 1086 aa15.52■□□□□ 0.07
USH1C-201ENST00000005226 CALCRLQ16602 461 aa15.52■□□□□ 0.07
USH1C-201ENST00000005226 GALNT17Q6IS24 598 aa15.52■□□□□ 0.07
USH1C-201ENST00000005226 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.07
USH1C-201ENST00000005226 KRT12Q99456 494 aa15.52■□□□□ 0.07
USH1C-201ENST00000005226 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.52■□□□□ 0.07
USH1C-201ENST00000005226 HEXIM1O94992 359 aaKnown RBP15.51■□□□□ 0.07
USH1C-201ENST00000005226 LCA5LO95447 670 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 PRLRP16471 622 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 EIF6P56537 245 aaKnown RBP15.51■□□□□ 0.07
USH1C-201ENST00000005226 POLR2FP61218 127 aaKnown RBP15.51■□□□□ 0.07
USH1C-201ENST00000005226 EHHADHQ08426 723 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 UNC13DQ70J99 1090 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 NOX5Q96PH1 765 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 EYA3Q99504 573 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 MAGEF1Q9HAY2 307 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 TRAF5O00463 557 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 OPA1O60313 960 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 KLRC1P26715 233 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 GUCY1A3Q02108 690 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 ZNF572Q7Z3I7 529 aaPredicted RBP15.51■□□□□ 0.07
USH1C-201ENST00000005226 CLEC10AQ8IUN9 316 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 SNX29Q8TEQ0 813 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 TBC1D5Q92609 795 aa15.51■□□□□ 0.07
USH1C-201ENST00000005226 ZNF233A6NK53 670 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 NOL4O94818 638 aa15.5■□□□□ 0.07
USH1C-201ENST00000005226 KLHL7Q8IXQ5 586 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms