RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Atp13a3Q5XF89 1219 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Mtmr6Q8VE11 617 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tc2nQ91XT6 489 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Coa7Q921H9 231 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gtpbp4Q99ME9 634 aaKnown RBP10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Desi2Q9D291 194 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tgm5Q9D7I9 724 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ubiad1Q9DC60 336 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Abhd2Q9QXM0 425 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Vstm4T1NXB5 319 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm4307E9PZY4 289 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm4312K9J7E2 289 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Flot1O08917 428 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Slc2a13Q3UHK1 637 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gas7Q60780 421 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tmco3Q8BH01 678 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Zdhhc14Q8BQQ1 489 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cacnb1Q8R3Z5 597 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cyp2c69E9PXC3 491 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cyp2c40P56657 491 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Rps12P63323 132 aaKnown RBP10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 P4ha1Q60715 534 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Meis1Q60954 390 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Smarca1Q6PGB8 1046 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Rps6ka5Q8C050 863 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ildr1Q8CBR1 537 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ccdc14Q8K2J4 934 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Acat1Q8QZT1 424 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Eif2ak1Q9Z2R9 619 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Usp17ldG5E8G2 545 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Usp17lcG5E8I7 545 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm4758L7N258 96 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Dnm2P39054 870 aaKnown RBP10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Map3k9Q3U1V8 1077 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Slc9a2Q3ZAS0 814 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Znf697Q569E7 569 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Trpc6Q61143 930 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ptger2Q62053 362 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Armcx3Q8BHS6 379 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Fam177a1Q8BR63 207 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 CutaQ9CQ89 177 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Lrp2bpQ9D4C6 346 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ltbp2O08999 1813 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Magea6O89010 325 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Bace1P56818 501 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 GmpsQ3THK7 693 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 TfrcQ62351 763 aaKnown RBP10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Magea3Q6T340 320 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Etf1Q8BWY3 437 aaKnown RBP10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Rhobtb3Q9CTN4 611 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cdca7Q9D0M2 382 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tjap1Q9DCD5 539 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tnip1Q9WUU8 647 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Myh8P13542 1937 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 ByslO54825 436 aaKnown RBP10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Mpp3O88910 568 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Man1a2P39098 641 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Meis2P97367 477 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Mapk4Q6P5G0 583 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Txndc5Q91W90 417 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 MymkQ9D1N4 221 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Mfap3lQ9D3X9 409 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Txnrd2Q9JLT4 524 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ly6iQ9WU67 134 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Lamb1P02469 1786 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Scgb2b18A0A087WPA9 112 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Samsn1P57725 372 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tmem132dQ76HP3 1097 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Slc17a8Q8BFU8 601 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Fbxo28Q8BIG4 368 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Rbm41Q8JZV4 413 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 C8aQ8K182 587 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Vps18Q8R307 973 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ccdc12Q8R344 166 aaKnown RBP10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tesk2Q8VCT9 570 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Mis18aQ9CZJ6 204 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Mtcl1Q3UHU5 1945 aa10.59□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm5737A0A140LI11 423 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Dclk3Q8BWQ5 790 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Q8C5C9 218 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Arl8aQ8VEH3 186 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ppp1r3gQ9CW07 347 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ccdc89Q9DA73 370 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Btaf1E9QAE3 1848 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Fyb2A2A995 729 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 EporP14753 507 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nap1l1P28656 391 aaKnown RBP10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nol4P60954 483 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Uri1Q3TLD5 531 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ecm29Q6PDI5 1840 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Traf3ip3Q8C0G2 513 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nek9Q8K1R7 984 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pabpc6Q9D4E6 643 aaKnown RBP10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Usp14Q9JMA1 493 aaKnown RBP10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Myl7Q9QVP4 175 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Arhgap4B1AUY3 965 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nfxl1E9Q8I7 918 aaKnown RBP10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Prkg1P0C605 671 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 EmbP21995 330 aa10.58□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Psmb7P70195 277 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms