RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Gm11549A0A286YD83 63 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Skor2A7M7C7 1008 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Atp9aO70228 1047 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Tdo2P48776 406 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Tmem132dQ76HP3 1097 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Dusp9Q7TNL7 452 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Map1sQ8C052 973 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gripap1Q8VD04 806 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ulk4Q3V129 1303 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 ArP19091 899 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Il6stQ00560 917 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Esyt1Q3U7R1 1092 aaKnown RBP9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Cep63Q3UPP8 700 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Fstl1Q62356 306 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Galnt17Q7TT15 598 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ece2Q80Z60 881 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Naa30Q8CES0 364 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Appl2Q8K3G9 662 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Myo1hQ9D6A1 958 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 JcadQ5DTX6 1320 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Itgb5O70309 798 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Col9a2Q07643 688 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Tbc1d10bQ8BHL3 798 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Stard7Q8R1R3 373 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Limd1Q9QXD8 668 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Clic4Q9QYB1 253 aa9.45□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gm43738A0A0G2JEA5 862 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gm44511A0A0N4SW10 223 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Zfp853A0A1D5RM95 733 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Trdmt1O55055 415 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Klrb1bP27812 223 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Epha2Q03145 977 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Slc2a13Q3UHK1 637 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Trappc3lQ4KL14 181 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ces5aQ6AW46 575 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Sestd1Q80UK0 696 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 P2ry10Q8BFU7 328 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Prkag3Q8BGM7 489 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Cdca8Q8BHX3 289 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Bloc1s4Q8VED2 215 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Q9DAQ4 598 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Leng1Q9DB98 261 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Mxra8Q9DBV4 442 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Aox1O54754 1333 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Grin1P35438 938 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Irs1P35569 1233 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Leo1Q5XJE5 667 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ddx4Q61496 702 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 IgflQ6B9Z0 140 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Znf653Q6YND2 615 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Recql4Q75NR7 1216 aaKnown RBP9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Pramel7Q810Y8 479 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Zdhhc15Q8BGJ0 337 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Cdkn2aipQ8BI72 563 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Usp20Q8C6M1 916 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Mknk2Q8CDB0 459 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Vps16Q920Q4 839 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Coa7Q921H9 231 aa9.44□□□□□ -0.9
Trim39-205ENSMUST00000173369 Wdr33Q8K4P0 1330 aaKnown RBP9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Mcm3P25206 812 aaKnown RBP9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Nedd1P33215 660 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Cyfip1Q7TMB8 1253 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gga3Q8BMI3 718 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 LRWD1Q8BUI3 648 aaKnown RBP9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Lmbrd1Q8K0B2 537 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Fgd4Q91ZT5 766 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Tas1r1Q99PG6 842 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Kcnh7Q9ER47 1195 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Col6a3E9PWQ3 3284 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gm9857F7CXR1 130 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Pik3r1P26450 724 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gcnt1Q09324 428 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ice2Q3UZ18 988 aaKnown RBP9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Moxd2Q7TT41 619 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 GopcQ8BH60 463 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Trim47Q8C0E3 641 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 NaspQ99MD9 773 aaKnown RBP9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Kdm8Q9CXT6 414 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Serpinb3bQ9D1Q5 387 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Znf687Q9D2D7 1237 aa9.43□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gm45015A0A140LII9 184 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Gm18336A0A140LIU8 765 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Phka1P18826 1241 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ica1lQ3TY65 431 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Nlrp2Q4PLS0 1046 aaKnown RBP9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Atp1a3Q6PIC6 1013 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Samm50Q8BGH2 469 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Arhgef19Q8BWA8 802 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Calhm6Q8C9E8 313 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 NapaQ9DB05 295 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Rcan1Q9JHG6 198 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Rasa1E9PYG6 1038 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Etaa1Q5SVT3 877 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Mybpc2Q5XKE0 1136 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Tcaf3Q6QR59 914 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Vps53Q8CCB4 832 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Evc2Q8K1G2 1220 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Bicd2Q921C5 820 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ccer1Q9CQL2 403 aa9.42□□□□□ -0.9
Trim39-205ENSMUST00000173369 Tbx20Q9ES03 445 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms