RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Stx12Q9ER00 274 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ybx3Q9JKB3 361 aaKnown RBP20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pja1O55176 578 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Nmt2O70311 529 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 HunkO88866 714 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cdca7lQ922M5 438 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Nup50Q9JIH2 466 aaKnown RBP20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Nr2c1Q505F1 590 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 IarsQ8BU30 1262 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 KynuQ9CXF0 464 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 IcoslgQ9JHJ8 322 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pus3Q9JI38 481 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Gm3402K7N5P2 326 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Mtco1P00397 514 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Celf1P28659 486 aaKnown RBP20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cyp2c39P56656 490 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Swap70Q6A028 585 aaKnown RBP20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pym1Q8CHP5 203 aaKnown RBP20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Creb3l3Q91XE9 479 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Sik3Q6P4S6 1311 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Zfp850J3QPC5 689 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cyp11b2P15539 500 aa20.06■□□□□ 0.8
Sort1-203ENSMUST00000135636 Chrna5Q2MKA5 467 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Rnf207Q3V3A7 635 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Papd5Q68ED3 633 aaKnown RBP20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Gja8P28236 440 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Nek1P51954 1203 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Dnajc28Q8VCE1 385 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Maip1Q8BHE8 291 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Atg3Q9CPX6 314 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Desi2Q9D291 194 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Lonrf2B2RT44 518 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Q80ZQ3 298 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Cep126Q0VBV7 1103 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Lrriq3Q14DL3 633 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ift20Q61025 132 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pcdha4O88689 947 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Q3KNL4 93 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ripor2Q80U16 1078 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 6820408C15RikQ8BJX2 354 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Zfp449Q8CB76 518 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ipo11Q8K2V6 975 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 Slc8a2Q8K596 921 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 FktnQ8R507 461 aa20.05■□□□□ 0.8
Sort1-203ENSMUST00000135636 DgkkE9Q7N4 1118 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Lig1P37913 916 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Hip1Q8VD75 1029 aaKnown RBP20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Nr2f2P43135 414 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Csgalnact2Q8C1F4 542 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Gbp5Q8CFB4 590 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Bfsp1A2AMT1 669 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Lrch2Q3UMG5 773 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Nxf7Q80SZ6 620 aaKnown RBP20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Wbp11Q923D5 641 aaKnown RBP20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Krt34Q9D646 392 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Proca1B0QZF7 307 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pcdhb9E9Q5G2 828 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Nsun7Q14AW5 724 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Usp50Q6P8X6 390 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Sept9Q80UG5 583 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ankrd24Q80VM7 985 aa20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pqbp1Q91VJ5 263 aaKnown RBP20.04■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pfdn4Q3UWL8 134 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Satb1Q60611 764 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Myef2Q8C854 591 aaKnown RBP20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Prpf6Q91YR7 941 aaKnown RBP20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 SfnO70456 248 aaKnown RBP20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Krt12Q64291 487 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Morc2aQ69ZX6 1030 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Spon1Q8VCC9 807 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 CopeO89079 308 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ankrd13cQ3UX43 541 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 CoilQ5SU73 570 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ush1gQ80T11 461 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Snrnp35Q9D384 244 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Scnn1bQ9WU38 638 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Plxnc1Q9QZC2 1574 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Mmrn2A6H6E2 943 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 FosP01101 380 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Acot6Q32Q92 419 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Stk38lQ7TSE6 464 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Rnf112Q96DY5 654 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Gfpt2Q9Z2Z9 682 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Fam84aQ9D650 292 aa20.03■□□□□ 0.8
Sort1-203ENSMUST00000135636 Abcc3B2RX12 1523 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Naa30Q8CES0 364 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Pdia6Q922R8 440 aaKnown RBP20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Vwa3bJ9JI28 736 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Atf2P16951 487 aaKnown RBP20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 ZfxP17012 799 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Castor1Q9CWQ8 331 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Xpo4Q9ESJ0 1151 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Elf2Q9JHC9 593 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 NfkbibQ60778 359 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Tll1Q62381 1013 aa20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Ccdc124Q9D8X2 217 aaKnown RBP20.02■□□□□ 0.8
Sort1-203ENSMUST00000135636 Arl4aP61213 200 aa20.02■□□□□ 0.79
Sort1-203ENSMUST00000135636 DbnlQ62418 436 aa20.02■□□□□ 0.79
Sort1-203ENSMUST00000135636 Atxn7Q8R4I1 867 aa20.02■□□□□ 0.79
Sort1-203ENSMUST00000135636 Myo1eE9Q634 1107 aa20.02■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms