RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ago4Q8CJF8 861 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Washc1Q8VDD8 475 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Adgra2Q91ZV8 1336 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Herc3A6H6S0 1050 aa23.77■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Prpmp5E9PXN1 296 aa23.77■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Eps15P42567 897 aa23.77■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Appl2Q8K3G9 662 aa23.77■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Itm2cQ91VK4 269 aa23.77■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Mx2Q9WVP9 655 aa23.77■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Brpf3B2KF05 1204 aaKnown RBP23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Rps6P62754 249 aaKnown RBP23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Gba2Q69ZF3 918 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Olfr832Q7TRG9 312 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Sox30Q8CGW4 782 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Mbtps2Q8CHX6 515 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Traf7Q922B6 594 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Extl2Q9ES89 330 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Grin2dQ03391 1323 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Tanc1Q0VGY8 1856 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Rapgefl1Q68EF8 662 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 CnstQ8CBC4 711 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Snap47Q8R570 413 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Pkd2l2Q9JLG4 621 aa23.76■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Cdc27A2A6Q5 825 aa23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Apol7aB2RT54 418 aa23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Pcdh11xF6ZNL5 1338 aa23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Slc16a10Q3U9N9 512 aa23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Usp13Q5BKP2 858 aa23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 PhipQ8VDD9 1821 aaKnown RBP23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 CrygnQ8VHL5 183 aa23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Plcb1Q9Z1B3 1216 aa23.75■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Camsap3Q80VC9 1252 aa23.74■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Coa7Q921H9 231 aa23.74■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Ppp1r3gQ9CW07 347 aa23.74■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Krtap5-3Q9D226 196 aa23.74■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 SetQ9EQU5 289 aaKnown RBP23.74■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Gm5624F6ZZG8 207 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Stat3P42227 770 aaKnown RBP23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Nf2P46662 596 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Setd4P58467 439 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Mettl14Q3UIK4 456 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Micall1Q8BGT6 870 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Ano10Q8BH79 659 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Slc45a1Q8BIV7 751 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Mmel1Q9JLI3 765 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 GsdmeQ9Z2D3 512 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Eif2ak1Q9Z2R9 619 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Fndc3c1Q6DFV6 1356 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Cntnap5cQ0V8T7 1305 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 JcadQ5DTX6 1320 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Disp2Q8CIP5 1345 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Cspp1B2RX88 1205 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Meis1Q60954 390 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Znf618Q80YY7 953 aaKnown RBP23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Ildr1Q8CBR1 537 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Slc12a8Q8VI23 705 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 MyocdQ8VIM5 935 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Trim44Q9QXA7 346 aa23.73■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Cyp2j7A0A140T8U1 504 aa23.72■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Adamts19P59509 1210 aa23.72■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Grik5Q61626 979 aa23.72■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Adam39Q7M762 756 aa23.72■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Cavin1O54724 392 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Itgb5O70309 798 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Psmc2P46471 433 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Erbb2P70424 1256 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Znf652Q5DU09 608 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Fndc3bQ6NWW9 1207 aaKnown RBP23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Cep135Q6P5D4 1140 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Taok2Q6ZQ29 1240 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Rtp1Q8C8C1 263 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Ces4aQ8R0W5 563 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Tmod4Q9JLH8 345 aa23.71■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Skint7A7XV04 395 aa23.7■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Gm3095E9Q058 166 aa23.7■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Barx2O08686 283 aa23.7■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Nbr1P97432 988 aa23.7■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Tmem132dQ76HP3 1097 aa23.7■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Trim9Q8C7M3 817 aa23.7■■□□□ 1.39
Ccdc88a-202ENSMUST00000109477 Oip5A2AQ14 241 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Mcm6P97311 821 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Atp11aP98197 1187 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Kcnb1Q03717 857 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Neurl1bQ0MW30 546 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Usp17leQ7M764 540 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Nipa1Q8BHK1 323 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Rassf3Q99P51 232 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Syt10Q9R0N4 523 aa23.7■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Gm4758L7N258 96 aa23.69■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 ArP19091 899 aa23.69■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Fdxacb1Q3UY23 622 aa23.69■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Txndc16Q7TN22 820 aa23.69■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Tmx1Q8VBT0 278 aa23.69■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Npm3Q9CPP0 175 aaKnown RBP23.69■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Stim2P83093 746 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Evi5P97366 809 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 SelpQ01102 768 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Slc2a13Q3UHK1 637 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Islr2Q5RKR3 745 aa23.68■■□□□ 1.38
Ccdc88a-202ENSMUST00000109477 Gas7Q60780 421 aa23.68■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms