RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Kcnk18Q6VV64 394 aa34.47■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Gigyf2Q6Y7W8 1291 aaKnown RBP34.47■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Fgd4Q91ZT5 766 aa34.47■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Sertad1Q9JL10 236 aa34.47■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Cyp7b1Q60991 507 aa34.46■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Kif5bQ61768 963 aa34.46■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 CnstQ8CBC4 711 aa34.46■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Saal1Q9D2C2 474 aa34.46■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Dhtkd1A2ATU0 921 aa34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Plekha7Q3UIL6 1118 aaKnown RBP34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Lrrc14bQ3UJB3 510 aa34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Hdhd5Q91WM2 419 aa34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Nxf1Q99JX7 618 aaKnown RBP34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Pbx4Q99NE9 378 aa34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Dnajc19Q9CQV7 116 aa34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Clic4Q9QYB1 253 aa34.45■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Dennd4aE9Q8V6 1869 aa34.45■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Ccdc78D3Z5T1 437 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Hoxd11P23813 323 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Psg29Q3URN6 468 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Prmt6Q6NZB1 378 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Tas2r124Q7M718 309 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Prkag2Q91WG5 566 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Kdm8Q9CXT6 414 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Cep72Q9D3R3 646 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Wdr64Q9D565 1086 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Slc39a2G3X943 309 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Irs1P35569 1233 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Rbp3P49194 1234 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Kcnj11Q61743 390 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Bloc1s4Q8VED2 215 aa34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Ddx41Q91VN6 622 aaKnown RBP34.44■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Mt-CybP00158 381 aa34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Lrrfip1Q3UZ39 729 aaKnown RBP34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Tfe3Q64092 572 aaKnown RBP34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Nap1l3Q794H2 544 aa34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 PicalmQ7M6Y3 660 aaKnown RBP34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Usp6nlQ80XC3 819 aa34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Mettl5Q8K1A0 209 aa34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Dnajc18Q9CZJ9 357 aa34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Mipol1Q9D9F8 279 aa34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Vav3Q9R0C8 847 aa34.43■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Lamb2Q61292 1799 aa34.42■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Atp9aO70228 1047 aa34.42■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 PparaP23204 468 aa34.42■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Lrrc36Q3V0M2 755 aa34.42■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Tbc1d10bQ8BHL3 798 aa34.42■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Coa7Q921H9 231 aa34.42■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 PolkQ9QUG2 852 aa34.42■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 SktA2AQ25 1946 aaKnown RBP34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Timm44O35857 452 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Fam205cQ80YD3 371 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Samm50Q8BGH2 469 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Hexim1Q8R409 356 aaKnown RBP34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Cpb1B2RS76 415 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Esr2O08537 530 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Cdh15P33146 784 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Lpar1P61793 364 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Nlrp2Q4PLS0 1046 aaKnown RBP34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Cnnm4Q69ZF7 771 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Ece2Q80Z60 881 aa34.41■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Gm43951A0A0N4SUT6 962 aa34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Olfr67F8VPJ8 320 aa34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Syt2P46097 422 aa34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 PtpreP49446 699 aa34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Gtf2f1Q3THK3 508 aaKnown RBP34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Bag4Q8CI61 457 aa34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Trim11Q99PQ2 467 aa34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Calml3Q9D6P8 149 aa34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Hic2Q9JLZ6 619 aaKnown RBP34.4■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Pqbp1Q91VJ5 263 aaKnown RBP34.39■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Msgn1Q9JK54 188 aa34.39■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Arih1Q9Z1K5 555 aa34.39■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 Lama2Q60675 3118 aaKnown RBP34.39■■■■□ 3.1
Ctdnep1-201ENSMUST00000108593 RptorQ8K4Q0 1335 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Rasa1E9PYG6 1038 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Mroh8E9PYI4 1049 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Gm38392E9Q2A2 434 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Sept4P28661 478 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Rit2P70425 217 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 PhkbQ7TSH2 1085 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Tbc1d22bQ80VE5 505 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Bbs9Q811G0 885 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Mtmr3Q8K296 1196 aa34.38■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 TazI7HJS2 263 aa34.37■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Dhx15O35286 795 aaKnown RBP34.37■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Ly6dP35459 127 aa34.37■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Fam189a2Q4FZH1 290 aa34.37■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Ccdc85aQ5SP85 500 aa34.37■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Yeats4Q9CR11 227 aaKnown RBP34.37■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Rpap3Q9D706 660 aa34.37■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Ly9Q01965 654 aa34.36■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Gtf3c3Q3TMP1 882 aa34.36■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Pbxip1Q3TVI8 727 aa34.36■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Etaa1Q5SVT3 877 aa34.36■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Stk38Q91VJ4 465 aa34.36■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Limd1Q9QXD8 668 aa34.36■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Magea4F2Z493 315 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Gm21969J3QJZ1 289 aa34.35■■■■□ 3.09
Ctdnep1-201ENSMUST00000108593 Nr5a1P33242 462 aa34.35■■■■□ 3.09
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms