RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Aox3G3X982 1335 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 CaluO35887 315 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cct8l1Q80YT3 562 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Prpf6Q91YR7 941 aaKnown RBP13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ccdc91Q9D8L5 442 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ube2oQ6ZPJ3 1288 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ints8Q80V86 995 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Pgrmc1O55022 195 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Opa1P58281 960 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Stmn4P63042 189 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rpusd2Q149F1 553 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Supt20hQ7TT00 530 aaKnown RBP13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 4930523C07RikE9Q2T4 99 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Stat3P42227 770 aaKnown RBP13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nsun2Q1HFZ0 757 aaKnown RBP13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Asap3Q5U464 904 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gps2Q921N8 327 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 1700016D06RikQ9DAA5 166 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Sertad1Q9JL10 236 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Xrcc5P27641 732 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Setd4P58467 439 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Peg10Q7TN75 958 aaKnown RBP12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tmc4Q7TQ65 694 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Skor1Q8BX46 964 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Fam114a1Q9D281 569 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Wdr19Q3UGF1 1341 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gm45140A0A0N4SUM8 220 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gm3415J3QMS8 315 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Esyt2Q3TZZ7 845 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 GopcQ8BH60 463 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Haus1Q8BHX1 278 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Dpp9Q8BVG4 862 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Alpk1Q9CXB8 1231 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Erp44Q9D1Q6 406 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gm3404Q9D506 307 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Sucla2Q9Z2I9 463 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Eif2ak1Q9Z2R9 619 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ccna1Q61456 421 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Spa17Q62252 149 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Mad2l2Q9D752 211 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Fam217aQ9D9W6 419 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Scyl1Q9EQC5 806 aaKnown RBP12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 4931408C20RikE9PWP9 1381 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nfx1B1AY10 1114 aaKnown RBP12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gbp8Q2V6D6 525 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 GmpsQ3THK7 693 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rsad1Q5SUV1 442 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ccdc125Q5U465 500 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ces1eQ64176 562 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tmod3Q9JHJ0 352 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 B3galt4Q9Z0F0 371 aa12.99□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tgfb2P27090 414 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Trip13Q3UA06 432 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Spata5Q3UMC0 893 aaKnown RBP12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Fam228aQ8CDW1 299 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nup58Q8R332 587 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cbwd1Q8VEH6 393 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Mms19Q9D071 1031 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nme9A0A1L1SUL6 329 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tubb5P99024 444 aaKnown RBP12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 FcgrtQ61559 365 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Trim21Q62191 470 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Kiaa1841Q68FF0 718 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rcor2Q8C796 523 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 CerkQ8K4Q7 531 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rwdd2aQ9D9S3 292 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Camta1A2A891 1682 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ccng2O08918 344 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Atp2a2O55143 1044 aaKnown RBP12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tex35Q14BK3 207 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rnf207Q3V3A7 635 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gm5168Q4KL04 211 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ankrd45Q810N6 248 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 FktnQ8R507 461 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Aak1Q3UHJ0 959 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Haus7Q8BKT8 364 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Irx4Q9QY61 515 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Kiaa0232Q80U59 1396 aaKnown RBP12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Pabpc1lA2A5N3 607 aaKnown RBP12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Mmp20P57748 482 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cdr2P97817 455 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Stard7Q8R1R3 373 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Usp11Q99K46 921 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Mxra7Q9CZH7 178 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tex21Q9R0U9 575 aa12.98□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Pik3c2aQ61194 1686 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rgs9O54828 675 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 AdkP55264 361 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tmem39bQ810L4 492 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Hgh1Q8C3I8 393 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Plekhg6Q8R0J1 787 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Btn2a2A4QPC6 514 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Zbtb8osQ505B7 168 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ift20Q61025 132 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Lca5Q80ST9 704 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Sar1bQ9CQC9 198 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cd2apQ9JLQ0 637 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Dync1i1O88485 628 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 CnpP16330 420 aa12.97□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Slc2a13Q3UHK1 637 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms