RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Epb41l4aP52963 686 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Fam83bQ0VBM2 1012 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Sec31aQ3UPL0 1230 aaKnown RBP21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Znf280dQ68FE8 974 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Ncapg2Q6DFV1 1138 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Armcx3Q8BHS6 379 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Srp68Q8BMA6 625 aaKnown RBP21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Slc13a4Q8BZ82 625 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Cdan1Q8CC12 1239 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Sde2Q8K1J5 448 aaKnown RBP21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Matr3Q8K310 846 aaKnown RBP21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Eif3hQ91WK2 352 aaKnown RBP21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Dynll2Q9D0M5 89 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 4931423N10RikQ9D4J9 382 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 March8Q9DBD2 286 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 C2cd2E9Q3C1 696 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Kcna1P16388 495 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Lig1P37913 916 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Calcoco1Q8CGU1 691 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Kbtbd4Q8R179 534 aa21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Apol6B7ZC55 329 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Celf1P28659 486 aaKnown RBP21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Spag7Q7TNE3 227 aaKnown RBP21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Nxnl2Q9D531 156 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Tfap4Q9JIZ5 338 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Sept2P42208 361 aaKnown RBP21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Mcm5P49718 733 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Tnni3kQ5GIG6 834 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Grm4Q68EF4 912 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Slc51bQ80WK2 128 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Q8BWG4 1187 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 SltmQ8CH25 1031 aaKnown RBP21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Klhl20Q8VCK5 604 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Smc6Q924W5 1097 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 MycbpQ9EQS3 103 aa21.03■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Gm45208A0A140LJ36 292 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 XlrP05531 208 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Man1a2P39098 641 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Carmil2Q3V3V9 1296 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Gm5169Q5M8P2 212 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Mybpc2Q5XKE0 1136 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Kcnj11Q61743 390 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Lca5Q80ST9 704 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 LrmdaQ9D9B4 229 aa21.02■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Ltn1Q6A009 1767 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ppp4cP97470 307 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Nr1d1Q3UV55 615 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ces3aQ63880 571 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Rbm26Q6NZN0 1012 aaKnown RBP21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ces3bQ8VCU1 571 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 AdpgkQ8VDL4 496 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 AvenQ9D9K3 342 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Cd274Q9EP73 290 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Plcb1Q9Z1B3 1216 aa21.02■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ccdc85cE9Q6B2 420 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Tnnc1P19123 161 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Eva1cP58659 440 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Rpusd2Q149F1 553 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Hdhd2Q3UGR5 259 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Npdc1Q64322 332 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Exoc3Q6KAR6 755 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Tmem179Q8BHH9 233 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Cgref1Q8R1U2 281 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Alg1Q921Q3 482 aa21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 HibadhQ99L13 335 aaKnown RBP21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ccdc43Q9CR29 222 aaKnown RBP21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Prpf4Q9DAW6 521 aaKnown RBP21.01■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Zscan18E9PUD6 809 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Zfpm1O35615 995 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Prl2c2P04095 224 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Lmnb2P21619 596 aaKnown RBP21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Slc30a9Q5IRJ6 567 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Shc3Q61120 474 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Mapk6Q61532 720 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ccdc189Q6NZQ0 333 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Rnf187Q8BFX1 236 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Erlin2Q8BFZ9 340 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Cc2d1bQ8BRN9 848 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Cog5Q8C0L8 829 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Zfp446Q8C9M8 523 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Slc14a2Q8R4T9 930 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Aipl1Q924K1 328 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ccdc105Q9D4K7 499 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Adarb2Q9JI20 745 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Map3k15A2AQW0 1331 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Mx1P09922 631 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Gga2Q6P5E6 603 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Ankrd24Q80VM7 985 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Haus2Q9CQS9 234 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Lrrc57Q9D1G5 239 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Spata17Q9D552 379 aa21■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Gm4985A2ALC6 410 aa20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Acsbg2Q2XU92 667 aa20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Prpf38aQ4FK66 312 aaKnown RBP20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Sh3gl1Q62419 368 aa20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Git1Q68FF6 770 aa20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Lrrcc1Q69ZB0 1026 aa20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 BlmhQ8R016 455 aa20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Klc4Q9DBS5 619 aa20.99■□□□□ 0.95
Ccdc50-201ENSMUST00000039443 Znf287Q9EQB9 759 aa20.99■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms