RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Apol10bG3X9K7 334 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Cacna2d1O08532 1103 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Wdr44Q6NVE8 915 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Rassf6Q80UQ2 353 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nop53Q8BK35 484 aaKnown RBP11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Atp1a1Q8VDN2 1023 aaKnown RBP11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nfu1Q9QZ23 255 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tulp1Q9Z273 543 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Samd15F6XZJ7 620 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ap1b1O35643 943 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Stat3P42227 770 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Acot10Q32MW3 439 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Cct6bQ61390 531 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 ZyxQ62523 564 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ccpg1Q640L3 753 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Asic2Q925H0 512 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Acsl3Q9CZW4 720 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tmod4Q9JLH8 345 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Zfyve9A2A8R0 1397 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ttc13A0A1L1SSC7 844 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ccng2O08918 344 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Xxylt1Q3U4G3 392 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Vmn1r209Q5NC97 312 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Skor1Q8BX46 964 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mtmr4Q91XS1 1190 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mfap3Q922T2 349 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Copb1Q9JIF7 953 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Topaz1E5FYH1 1653 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ccdc152E9PX14 254 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Sec24cG3X972 1096 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Pth1rP41593 591 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Stxbp3Q60770 592 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Vat1lQ80TB8 417 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Clec16aQ80U30 1036 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ccdc40Q8BI79 1192 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 AsphQ8BSY0 741 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Fermt3Q8K1B8 665 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Syce1Q9D495 329 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Znf394Q9Z1D9 521 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mtmr7Q9Z2C9 660 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Chd2E9PZM4 1827 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Prdm2A2A7B5 1709 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Rpl13P47963 211 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ccdc157Q5SPX1 718 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 GypcQ78HU7 95 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Efcab14Q8BGQ6 484 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 CgasQ8C6L5 507 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Med10Q9CXU0 135 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Thap2Q9D305 217 aa11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Orc1Q9Z1N2 840 aaKnown RBP11.92□□□□□ -0.5
Msh3-201ENSMUST00000022220 Usp17lbE9Q9U0 468 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 MyocO70624 490 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Kcna1P16388 495 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gna15P30678 374 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mars2Q499X9 586 aaKnown RBP11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ublcp1Q8BGR9 318 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tsnaxip1Q99P25 704 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Sgpp1Q9JI99 430 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Acot3Q9QYR7 432 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tex13cD3YU32 604 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Pcdha4O88689 947 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Wee1P47810 646 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Drc1Q3USS3 753 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Swap70Q6A028 585 aaKnown RBP11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Sdccag8Q80UF4 717 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Anks1bQ8BIZ1 1259 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 MlphQ91V27 590 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Calml4Q91WQ9 153 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 4930550L24RikQ99PA7 320 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 DccP70211 1447 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tmem232Q5K6N0 675 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Lamc2Q61092 1191 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Irak1Q62406 710 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Hdac4Q6NZM9 1076 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 GopcQ8BH60 463 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Bpifb6Q8BU51 449 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Fbxo18Q8K2I9 1042 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Pstpip2Q99M15 334 aa11.91□□□□□ -0.5
Msh3-201ENSMUST00000022220 Rimbp3Q3V0F0 1606 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Pabpc1lA2A5N3 607 aaKnown RBP11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Cyp2c68K7N6C2 491 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Kctd16Q5DTY9 427 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Iws1Q8C1D8 766 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Adgra1Q8C4G9 578 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Syf2Q9D198 242 aaKnown RBP11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Eif4enif1Q9EST3 983 aaKnown RBP11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Armc3A2AU72 881 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Esr2O08537 530 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Rad51bO35719 350 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Snx25Q3ZT31 840 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ccna1Q61456 421 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Aggf1Q7TN31 711 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Naa15Q80UM3 865 aaKnown RBP11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tmem39bQ810L4 492 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Asnsd1Q8BFS9 627 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Dbndd2Q9CRD4 158 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 PigoQ9JJI6 1093 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Usp21Q9QZL6 566 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Igsf9bE9PZ19 1328 aa11.9□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gfpt1P47856 697 aa11.9□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms