RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Abcd1P48410 736 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Luc7l2Q7TNC4 392 aaKnown RBP12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Gpr139Q80UC8 345 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ctdspl2Q8BG15 465 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Rps6kc1Q8BLK9 1056 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 3830417A13RikQ8BQJ2 303 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Olfm5Q8BU90 496 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 HmcesQ8R1M0 353 aaKnown RBP12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ccdc92Q8VDN4 314 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Gucy1a3Q9ERL9 691 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Fmnl1Q9JL26 1094 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Cd2apQ9JLQ0 637 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ankrd2Q9WV06 328 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Sept3Q9Z1S5 350 aa12.65□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Gm20425E9Q035 978 aaKnown RBP12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Serpinb6eI7HJI3 429 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Atp2a2O55143 1044 aaKnown RBP12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Birc5O70201 140 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Myl3P09542 204 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Adssl1P28650 457 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 SrprbP47758 269 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 TbcaP48428 108 aaKnown RBP12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ccdc110Q3V125 848 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Alx1Q8C8B0 326 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Bola3Q8CEI1 110 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Tex19.1Q99MV2 351 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ttc14Q9CSP9 761 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Psma8Q9CWH6 250 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Gdap2Q9DBL2 498 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Pik3ap1Q9EQ32 811 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Rps6ka4Q9Z2B9 773 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Prss40A6H6T1 365 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Kif5cP28738 956 aaKnown RBP12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Pold1P52431 1105 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 PctpP53808 214 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ccdc174Q3U155 467 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Lrrc43Q3V0L5 667 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Wasf2Q8BH43 497 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Taok3Q8BYC6 898 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 MtrrQ8C1A3 696 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Erich5Q8K0S2 362 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Tekt2Q922G7 430 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Nphs1Q9QZS7 1256 aa12.64□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Kiaa1522A2A7S8 1013 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Izumo3A6PWV3 263 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ighmbp2P40694 993 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ugt1a2P70691 533 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Hdhd2Q3UGR5 259 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ppp1r12cQ3UMT1 782 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Antxr2Q6DFX2 487 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Pcdhb14Q6PB90 796 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 SowahdQ8BY98 327 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Sde2Q8K1J5 448 aaKnown RBP12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Arhgef6Q8K4I3 771 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Gm5580A0A0N4SVP8 411 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ube4aE9Q735 1028 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Scgb2b19J3QM75 112 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Trappc3O55013 180 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Gap43P06837 227 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Rpl13P47963 211 aaKnown RBP12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Prl2c1Q5SVL9 228 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Pabpc4Q6PHQ9 660 aaKnown RBP12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Kcnj14Q8JZN3 434 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Dnajc17Q91WT4 303 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 RtcbQ99LF4 505 aaKnown RBP12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Cyth1Q9QX11 398 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Sycp2lA0A0M3U1B0 842 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Atp8b5A3FIN4 1183 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Olfr310B2RVZ1 332 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Psmd14O35593 310 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Snx12O70493 165 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ripply1Q2WG77 201 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ift88Q61371 824 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 HelbQ6NVF4 1074 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Rbm28Q8CGC6 750 aaKnown RBP12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Tdrd7Q8K1H1 1086 aaKnown RBP12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Rbm19Q8R3C6 952 aaKnown RBP12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Lzts2Q91YU6 671 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 MmadhcQ99LS1 296 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Lonrf3Q9D4H7 753 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 ThegQ9JMB1 375 aa12.63□□□□□ -0.39
Sdc1-201ENSMUST00000020911 MipepA6H611 711 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Usp51B1AY15 661 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Samd15F6XZJ7 620 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Stat5bP42232 786 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Nub1P54729 614 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Inf2Q0GNC1 1273 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Acsbg2Q2XU92 667 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Clic6Q8BHB9 596 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 HlfQ8BW74 295 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Pkn3Q8K045 878 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Irak4Q8R4K2 459 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Dnajc3Q91YW3 504 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 WtapQ9ER69 396 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ugt1a8D3Z748 530 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Ugt1a10E9PXN7 530 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Sdc2P43407 202 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Pafah1b1P63005 410 aaKnown RBP12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Traf5P70191 558 aa12.62□□□□□ -0.39
Sdc1-201ENSMUST00000020911 Kctd19Q562E2 927 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms