RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Slx1bQ8BX32 270 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ccdc113Q8C5T8 377 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Mylk2Q8VCR8 613 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ppil4Q9CXG3 492 aaKnown RBP13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Myo1hQ9D6A1 958 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Nop56Q9D6Z1 580 aaKnown RBP13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ccdc124Q9D8X2 217 aaKnown RBP13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 CoasyQ9DBL7 563 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cyth1Q9QX11 398 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gm7168A0AUV4 508 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 GpiP06745 558 aaKnown RBP13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gbp1Q01514 589 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Tbc1d1Q60949 1255 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 GartQ64737 1010 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Prr18Q6PAN7 307 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Psma8Q9CWH6 250 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Wnk3Q80XP9 1757 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Serpinb6dQ3UWK8 375 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Adat2Q6P6J0 191 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ints8Q80V86 995 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Nucks1Q80XU3 234 aaKnown RBP13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Fam102bQ8BQS4 339 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Uap1Q91YN5 522 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Pde6cQ91ZQ1 861 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 HibadhQ99L13 335 aaKnown RBP13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ubxn8Q9QZ49 277 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gm7356A0A087WSA6 508 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 C2cd2E9Q3C1 696 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Parp2O88554 559 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Celf1P28659 486 aaKnown RBP13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Pcif1P59114 706 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Trim80Q3V061 624 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Vat1lQ80TB8 417 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Slfnl1Q8BHW9 410 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Rsad2Q8CBB9 362 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Eid1Q9DCR4 169 aa13.96□□□□□ -0.17
Clcn3-201ENSMUST00000004430 InhbeO08717 350 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Tal1P22091 329 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Rhpn1Q61085 643 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Nyap1Q6PFX7 833 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Eno4Q8C042 619 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Lin9Q8C735 542 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Snx1Q9WV80 522 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 CpdO89001 1377 aa13.96□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Chmp6P0C0A3 200 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Actn4P57780 912 aaKnown RBP13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Arhgap44Q5SSM3 814 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Tbc1d9bQ5SVR0 1263 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Cep104Q80V31 926 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 AsphQ8BSY0 741 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Txndc5Q91W90 417 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Col20a1Q923P0 1320 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Cpb1B2RS76 415 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 MycnP03966 462 aaKnown RBP13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Gap43P06837 227 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 ArsiQ32KI9 573 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Mtus1Q5HZI1 1210 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Spa17Q62252 149 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Smarca1Q6PGB8 1046 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Adcy2Q80TL1 1090 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 E330017A01RikQ8BU47 192 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Usp33Q8R5K2 909 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Pcdhb5Q91XZ5 792 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Xrcc4Q924T3 326 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Psrc1Q9D0P7 329 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Arl2bpQ9D385 163 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Gfpt2Q9Z2Z9 682 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Col18a1P39061 1774 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 March10E9PX79 788 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Becn2P0DM65 447 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Stmn4P63042 189 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Phc3Q8CHP6 981 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Slc26a7Q8R2Z3 656 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Tom1l1Q923U0 474 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Trmt112Q9DCG9 125 aa13.95□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Scgb2b18A0A087WPA9 112 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Trove2O08848 538 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Senp1P59110 640 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Ric8aQ3TIR3 530 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Vcpip1Q8CDG3 1220 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Apobec3Q99J72 440 aaKnown RBP13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 ArpinQ9D0A3 226 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Erp44Q9D1Q6 406 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Gm5134E9QAB5 671 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 MagohP61327 146 aaKnown RBP13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Ccdc33Q3ULW6 985 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Ccdc160Q3UYG1 323 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Sco1Q5SUC9 284 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 HarsQ61035 509 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Sh3gl1Q62419 368 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Ccdc189Q6NZQ0 333 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Stkld1Q80YS9 662 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Nup58Q8R332 587 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Thoc1Q8R3N6 657 aaKnown RBP13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 MagohbQ9CQL1 146 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Pacsin2Q9WVE8 486 aaKnown RBP13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Cib2Q9Z309 187 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Foxn2E9Q7L6 429 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Dact3Q0PHV7 610 aa13.94□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Krt9Q6RHW0 743 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms