RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Akap8Q9DBR0 687 aaKnown RBP10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Peg12Q9WVA7 283 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 1700016G14RikA0A286YCZ6 238 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Nhej1Q3KNJ2 295 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Fam183bQ5NC57 135 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gbp4Q61107 620 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Col14a1Q80X19 1797 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 ClasrpQ8CFC7 668 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Phc3Q8CHP6 981 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Eif3cQ8R1B4 911 aaKnown RBP10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Trub2Q91WG3 331 aaKnown RBP10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Sh2b1Q91ZM2 756 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tnip1Q9WUU8 647 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Arhgap4B1AUY3 965 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 XlrP05531 208 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ca8P28651 291 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Cacnb3P54285 484 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Mex3cQ05A36 652 aaKnown RBP10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 BC048507Q80ZS7 89 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 MtrrQ8C1A3 696 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 MlphQ91V27 590 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Cep19Q9CQA8 163 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Erp44Q9D1Q6 406 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Abhd2Q9QXM0 425 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tex21Q9R0U9 575 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Lbhd1A0A087WPA0 259 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Pabpc1lA2A5N3 607 aaKnown RBP10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Cpb1B2RS76 415 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gm2030D3Z7C4 212 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 P4hbP09103 509 aaKnown RBP10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tdo2P48776 406 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Actn4P57780 912 aaKnown RBP10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Senp1P59110 640 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Drc1Q3USS3 753 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 CnstQ8CBC4 711 aa10.4□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ppef2O35385 757 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tagap1P0CAX8 505 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Kcnb1Q03717 857 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sox13Q04891 613 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Atp8b1Q148W0 1251 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Specc1Q5SXY1 1067 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Fgfr1opQ66JX5 399 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Q8C1R3 189 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Spats2Q8K1N4 545 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Armc9Q9D2I5 817 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ncf2O70145 525 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Akr1b1P45376 316 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Plekha7Q3UIL6 1118 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Nr1d1Q3UV55 615 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Kctd19Q562E2 927 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 AsnsQ61024 561 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ezh2Q61188 746 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Fgd5Q80UZ0 1219 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pank4Q80YV4 820 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rasal3Q8C2K5 1041 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Vcpip1Q8CDG3 1220 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Prpf6Q91YR7 941 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 KynuQ9CXF0 464 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Krt71Q9R0H5 524 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Grem2O88273 168 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Men1O88559 611 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Siah1aP61092 282 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ice2Q3UZ18 988 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gja3Q64448 417 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 PigsQ6PD26 555 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Krt9Q6RHW0 743 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Galnt17Q7TT15 598 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Cog5Q8C0L8 829 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Cgref1Q8R1U2 281 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Alpk1Q9CXB8 1231 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ulk4Q3V129 1303 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Slit1Q80TR4 1531 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Etnk2A7MCT6 385 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ppfia4B8QI36 1187 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Dnajb6O54946 365 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 H2afzP0C0S6 128 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Stat3P42227 770 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 NfixP70257 488 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 H2afvQ3THW5 128 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ttbk2Q3UVR3 1243 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Znf697Q569E7 569 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sh3gl1Q62419 368 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pym1Q8CHP5 203 aaKnown RBP10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Atp6v0a4Q920R6 833 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Cyp2ab1S4R196 498 aa10.39□□□□□ -0.75
Col6a1-201ENSMUST00000001147 CluhQ5SW19 1315 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Vmn2r71L7N2D8 855 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Traf5P70191 558 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Snai1Q02085 264 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tlr13Q6R5N8 991 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Eps8l2Q99K30 729 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Klra17Q9JMA4 273 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gkap1Q9JMB0 366 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Angptl3Q9R182 455 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Dpcr1Q3TNW5 500 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sestd1Q80UK0 696 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Cracr2bQ80ZJ8 394 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ccdc28aQ8CEI3 192 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Olfr805Q8VFI4 319 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Spc24Q9D083 201 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms