RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	SLH1	P53327	1967 aa	Known RBP	7.8	□□□□□ -1.16
TGA1	tA(UGC)A	BCY1	P07278	416 aa	Known RBP	7.79	□□□□□ -1.16
TGA1	tA(UGC)A	NMT1	P14743	455 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	VAC17	P25591	423 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	EHT1	P38295	451 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	FTH1	P38310	465 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	MTG2	P38860	518 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	MAD3	P47074	515 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	TEL2	P53038	688 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	YNR021W	P53723	404 aa	Known RBP	7.79	□□□□□ -1.16
TGA1	tA(UGC)A	CSL4	P53859	292 aa	Predicted RBP	7.79	□□□□□ -1.16
TGA1	tA(UGC)A	YPL109C	Q02981	657 aa		7.79	□□□□□ -1.16
TGA1	tA(UGC)A	YMR111C	Q04461	462 aa	Predicted RBP	7.79	□□□□□ -1.16
TGA1	tA(UGC)A	TRX3	P25372	127 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	MVD1	P32377	396 aa	Known RBP	7.78	□□□□□ -1.16
TGA1	tA(UGC)A	YIL152W	P40455	235 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	ELP2	P42935	788 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	FAR3	P46671	204 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	YPT32	P51996	222 aa	Known RBP	7.78	□□□□□ -1.16
TGA1	tA(UGC)A	UBX4	P54730	416 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	TVP15	Q03860	143 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	MUS81	Q04149	632 aa	Predicted RBP	7.78	□□□□□ -1.16
TGA1	tA(UGC)A	YLR049C	Q12110	428 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	HSP42	Q12329	375 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	NOT5	Q12514	560 aa	Predicted RBP	7.78	□□□□□ -1.16
TGA1	tA(UGC)A	YKL068W-A	Q3E826	78 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	YCL012C	Q8J0M4	134 aa		7.78	□□□□□ -1.16
TGA1	tA(UGC)A	LEU4	P06208	619 aa	Known RBP	7.77	□□□□□ -1.17
TGA1	tA(UGC)A	ART10	P18634	518 aa	Known RBP	7.77	□□□□□ -1.17
TGA1	tA(UGC)A	OCA4	P25366	362 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	CDC5	P32562	705 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	COX13	P32799	129 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	YKR078W	P36158	585 aa	Known RBP	7.77	□□□□□ -1.17
TGA1	tA(UGC)A	BMT2	P38278	337 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.77	□□□□□ -1.17	not detected
TGA1	tA(UGC)A	IBA57	P47158	497 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	PMT3	P47190	753 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	ASK10	P48361	1146 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	GTR2	P53290	341 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	ERG13	P54839	491 aa	Known RBP	7.77	□□□□□ -1.17
TGA1	tA(UGC)A	PRO2	P54885	456 aa	Known RBP	7.77	□□□□□ -1.17
TGA1	tA(UGC)A	GIC2	Q06648	383 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	YDL121C	Q07541	149 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	TEN1	Q07921	160 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	XYL2	Q07993	356 aa		7.77	□□□□□ -1.17
TGA1	tA(UGC)A	RRP40	Q08285	240 aa	Known RBP	7.77	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-LR1	P0C2J4	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-F	P0CX61	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-GR2	P0CX62	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	BAS1	P22035	811 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	SLM5	P25345	492 aa	Known RBP	7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-C	P25383	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	ERG1	P32476	496 aa	Known RBP	7.76	□□□□□ -1.17
TGA1	tA(UGC)A	UGP1	P32861	499 aa	Known RBP	7.76	□□□□□ -1.17
TGA1	tA(UGC)A	CBP4	P37267	147 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	YHR210C	P38893	341 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	CAB2	P40506	365 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	JHD2	P47156	728 aa	Predicted RBP	7.76	□□□□□ -1.17
TGA1	tA(UGC)A	PEX25	Q02969	394 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-DR2	Q03483	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	MMT2	Q08970	484 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-B	Q12260	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-OR2	Q12293	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-DR1	Q12392	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-OR1	Q12439	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	TY2A-DR3	Q99303	438 aa		7.76	□□□□□ -1.17
TGA1	tA(UGC)A	HXK2	P04807	486 aa	Known RBP	7.75	□□□□□ -1.17
TGA1	tA(UGC)A	YMR085W	P0CF18	432 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	URA4	P20051	364 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	SGV1	P23293	657 aa	Known RBP	7.75	□□□□□ -1.17
TGA1	tA(UGC)A	MXR2	P25566	168 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	LDB16	P25587	256 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	BUB2	P26448	306 aa	Predicted RBP	7.75	□□□□□ -1.17
TGA1	tA(UGC)A	FUN30	P31380	1131 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	PTH2	P34222	208 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	CTP1	P38152	299 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	SEC31	P38968	1273 aa	Known RBP	7.75	□□□□□ -1.17
TGA1	tA(UGC)A	FAU1	P40099	211 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	MET18	P40469	1032 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	PRM10	P42946	383 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	NAS6	P50086	228 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	ROG1	P53118	685 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	PUS9	Q12069	462 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	GLO4	Q12320	285 aa		7.75	□□□□□ -1.17
TGA1	tA(UGC)A	RPL17A	P05740	184 aa	Known RBP	7.74	□□□□□ -1.17
TGA1	tA(UGC)A	COS2	P0CX12	379 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	COS3	P0CX13	379 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	CHA1	P25379	360 aa	Known RBP	7.74	□□□□□ -1.17
TGA1	tA(UGC)A	SPS22	P25380	463 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.74	□□□□□ -1.17	not detected
TGA1	tA(UGC)A	YMC1	P32331	307 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	MKK2	P32491	506 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	SUI1	P32911	108 aa	Known RBP	7.74	□□□□□ -1.17
TGA1	tA(UGC)A	ASC1	P38011	319 aa	Known RBP	7.74	□□□□□ -1.17
TGA1	tA(UGC)A	COS4	P43542	379 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	PTR3	P43606	678 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	RPL17B	P46990	184 aa	Known RBP	7.74	□□□□□ -1.17
TGA1	tA(UGC)A	HOC1	P47124	396 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	TRM9	P49957	279 aa		7.74	□□□□□ -1.17
TGA1	tA(UGC)A	YGR053C	P53234	283 aa		7.74	□□□□□ -1.17

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms