RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C HAS1Q03532 505 aaKnown RBP3.3□□□□□ -1.88
RPA135YPR010C MGR3Q04472 501 aa3.3□□□□□ -1.88
RPA135YPR010C YLL007CQ07799 665 aa3.3□□□□□ -1.88
RPA135YPR010C ATG10Q07879 167 aa3.3□□□□□ -1.88
RPA135YPR010C YLR012CQ07927 99 aa3.3□□□□□ -1.88
RPA135YPR010C CDC9P04819 755 aa3.29□□□□□ -1.88
RPA135YPR010C GCY1P14065 312 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
RPA135YPR010C DBP3P20447 523 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C RPS5P26783 225 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C SSE2P32590 693 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C SFA1P32771 386 aa3.29□□□□□ -1.88
RPA135YPR010C SIP2P34164 415 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C YKL100CP34248 587 aa3.29□□□□□ -1.88
RPA135YPR010C MRPL17P36528 281 aa3.29□□□□□ -1.88
RPA135YPR010C KAP104P38217 918 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C RRP3P38712 501 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C TOK1P40310 691 aa3.29□□□□□ -1.88
RPA135YPR010C YJR061WP40355 935 aa3.29□□□□□ -1.88
RPA135YPR010C IST3P40565 148 aaPredicted RBP3.29□□□□□ -1.88
RPA135YPR010C YJR115WP47152 169 aa3.29□□□□□ -1.88
RPA135YPR010C GMC2Q06201 188 aa3.29□□□□□ -1.88
RPA135YPR010C CDA1Q06702 301 aa3.29□□□□□ -1.88
RPA135YPR010C YEH2Q07950 538 aa3.29□□□□□ -1.88
RPA135YPR010C YLR036CQ07986 203 aa3.29□□□□□ -1.88
RPA135YPR010C NDD1Q08887 554 aa3.29□□□□□ -1.88
RPA135YPR010C YPL066WQ12194 479 aa3.29□□□□□ -1.88
RPA135YPR010C HSH49Q99181 213 aaPredicted RBP3.29□□□□□ -1.88
RPA135YPR010C RPS9AO13516 197 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C RIM1P32445 135 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C DSS4P32601 143 aa3.29□□□□□ -1.88
RPA135YPR010C ISC10P32645 267 aa3.29□□□□□ -1.88
RPA135YPR010C MRP8P35719 219 aa3.29□□□□□ -1.88
RPA135YPR010C HMT1P38074 348 aa3.29□□□□□ -1.88
RPA135YPR010C MRPS18P42847 217 aa3.29□□□□□ -1.88
RPA135YPR010C AGX1P43567 385 aa3.29□□□□□ -1.88
RPA135YPR010C YGL176CP46945 554 aa3.29□□□□□ -1.88
RPA135YPR010C BNA3P47039 444 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C CCT8P47079 568 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C YTP1P53584 459 aa3.29□□□□□ -1.88
RPA135YPR010C RPC11Q04307 110 aaPredicted RBP3.29□□□□□ -1.88
RPA135YPR010C PIB1Q06651 286 aa3.29□□□□□ -1.88
RPA135YPR010C CLP1Q08685 445 aaPredicted RBP3.29□□□□□ -1.88
RPA135YPR010C ATG29Q12092 213 aa3.29□□□□□ -1.88
RPA135YPR010C SAS5Q99314 248 aa3.29□□□□□ -1.88
RPA135YPR010C BCY1P07278 416 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C SEC63P14906 663 aa3.29□□□□□ -1.88
RPA135YPR010C RRP7P25368 297 aaPredicted RBP3.29□□□□□ -1.88
RPA135YPR010C SMI1P32566 505 aa3.29□□□□□ -1.88
RPA135YPR010C LDB7P38210 180 aa3.29□□□□□ -1.88
RPA135YPR010C SFB3P38810 929 aa3.29□□□□□ -1.88
RPA135YPR010C NOP16P40007 231 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C RIO2P40160 425 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C MMF1P40185 145 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C DIM1P41819 318 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C YJR096WP47137 282 aa3.29□□□□□ -1.88
RPA135YPR010C GET1P53192 235 aa3.29□□□□□ -1.88
RPA135YPR010C ERG26P53199 349 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C GND2P53319 492 aa3.29□□□□□ -1.88
RPA135YPR010C YNL033WP53964 284 aa3.29□□□□□ -1.88
RPA135YPR010C YNL019CP53975 284 aa3.29□□□□□ -1.88
RPA135YPR010C PIR1Q03178 341 aa3.29□□□□□ -1.88
RPA135YPR010C RTN1Q04947 295 aaKnown RBP3.29□□□□□ -1.88
RPA135YPR010C ICT1Q12385 394 aa3.29□□□□□ -1.88
RPA135YPR010C YMR084WA2P2R3 262 aa3.28□□□□□ -1.88
RPA135YPR010C SNF4P12904 322 aa3.28□□□□□ -1.88
RPA135YPR010C PHO81P17442 1178 aa3.28□□□□□ -1.88
RPA135YPR010C YAP1P19880 650 aaKnown RBP3.28□□□□□ -1.88
RPA135YPR010C EPT1P22140 391 aa3.28□□□□□ -1.88
RPA135YPR010C AGP1P25376 633 aa3.28□□□□□ -1.88
RPA135YPR010C PUP3P25451 205 aaKnown RBP3.28□□□□□ -1.88
RPA135YPR010C NIP1P32497 812 aaKnown RBP3.28□□□□□ -1.88
RPA135YPR010C SEC17P32602 292 aa3.28□□□□□ -1.88
RPA135YPR010C PXA2P34230 853 aa3.28□□□□□ -1.88
RPA135YPR010C FAD1P38913 306 aa3.28□□□□□ -1.88
RPA135YPR010C MET18P40469 1032 aa3.28□□□□□ -1.88
RPA135YPR010C YFL052WP43551 465 aa3.28□□□□□ -1.88
RPA135YPR010C TIS11P47977 285 aa3.28□□□□□ -1.88
RPA135YPR010C VEL1P53058 206 aa3.28□□□□□ -1.88
RPA135YPR010C SNO2P53823 222 aa3.28□□□□□ -1.88
RPA135YPR010C AQR1P53943 586 aa3.28□□□□□ -1.88
RPA135YPR010C MSC1Q03104 513 aa3.28□□□□□ -1.88
RPA135YPR010C YML119WQ03208 357 aa3.28□□□□□ -1.88
RPA135YPR010C COS7Q07788 383 aa3.28□□□□□ -1.88
RPA135YPR010C BDS1Q08347 646 aa3.28□□□□□ -1.88
RPA135YPR010C IOC2Q12072 812 aa3.28□□□□□ -1.88
RPA135YPR010C YLR126CQ12288 251 aa3.28□□□□□ -1.88
RPA135YPR010C ISN1Q99312 450 aa3.28□□□□□ -1.88
RPA135YPR010C FUS1P11710 512 aa3.28□□□□□ -1.88
RPA135YPR010C THR1P17423 357 aaKnown RBP3.28□□□□□ -1.88
RPA135YPR010C CIN8P27895 1000 aa3.28□□□□□ -1.88
RPA135YPR010C FUN30P31380 1131 aa3.28□□□□□ -1.88
RPA135YPR010C AST1P35183 429 aa3.28□□□□□ -1.88
RPA135YPR010C MTH1P35198 433 aa3.28□□□□□ -1.88
RPA135YPR010C STB6P36085 766 aa3.28□□□□□ -1.88
RPA135YPR010C GIP1P38229 639 aa3.28□□□□□ -1.88
RPA135YPR010C YIR007WP40566 764 aa3.28□□□□□ -1.88
RPA135YPR010C ERG10P41338 398 aaKnown RBP3.28□□□□□ -1.88
RPA135YPR010C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
RPA135YPR010C SNZ1Q03148 297 aa3.28□□□□□ -1.88
RPA135YPR010C TRM12Q04235 462 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms