RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W PSR2Q07949 397 aa2.17□□□□□ -2.06
SEC16YPL085W BTS1Q12051 335 aa2.17□□□□□ -2.06
SEC16YPL085W SKM1Q12469 655 aa2.17□□□□□ -2.06
SEC16YPL085W PUT2P07275 575 aa2.17□□□□□ -2.06
SEC16YPL085W FUN26P31381 517 aa2.17□□□□□ -2.06
SEC16YPL085W GCD11P32481 527 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W EAP1P36041 632 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W RSM22P36056 628 aa2.17□□□□□ -2.06
SEC16YPL085W TCD2P36101 447 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W FSH1P38777 243 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W INP51P40559 946 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W ALK1P43633 760 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W ATF2P53296 535 aa2.17□□□□□ -2.06
SEC16YPL085W OKP1P53298 406 aa2.17□□□□□ -2.06
SEC16YPL085W YNR065CP53751 1116 aa2.17□□□□□ -2.06
SEC16YPL085W MTD1Q02046 320 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W SEC13Q04491 297 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W YLR326WQ06170 240 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W YPR091CQ06833 770 aa2.17□□□□□ -2.06
SEC16YPL085W THP1Q08231 455 aa2.17□□□□□ -2.06
SEC16YPL085W RIB3Q99258 208 aa2.17□□□□□ -2.06
SEC16YPL085W YPR089WO13585 888 aa2.17□□□□□ -2.06
SEC16YPL085W HOP09932 586 aa2.17□□□□□ -2.06
SEC16YPL085W ERR1P0CX10 437 aa2.17□□□□□ -2.06
SEC16YPL085W ERR2P0CX11 437 aa2.17□□□□□ -2.06
SEC16YPL085W GCD2P12754 651 aaPredicted RBP2.17□□□□□ -2.06
SEC16YPL085W RRP43P25359 394 aaPredicted RBP2.17□□□□□ -2.06
SEC16YPL085W LRE1P25579 583 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W ORC2P32833 620 aa2.17□□□□□ -2.06
SEC16YPL085W MRS6P32864 603 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W BNA4P38169 460 aa2.17□□□□□ -2.06
SEC16YPL085W EXO84P38261 753 aa2.17□□□□□ -2.06
SEC16YPL085W BMT2P38278 337 aa2.17□□□□□ -2.06
SEC16YPL085W COS8P38723 381 aa2.17□□□□□ -2.06
SEC16YPL085W EMP65P40085 556 aa2.17□□□□□ -2.06
SEC16YPL085W ERR3P42222 437 aa2.17□□□□□ -2.06
SEC16YPL085W FAR3P46671 204 aa2.17□□□□□ -2.06
SEC16YPL085W HAM1P47119 197 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W YJR142WP47173 342 aa2.17□□□□□ -2.06
SEC16YPL085W YGR122WP53272 402 aa2.17□□□□□ -2.06
SEC16YPL085W GND2P53319 492 aa2.17□□□□□ -2.06
SEC16YPL085W CSL4P53859 292 aaPredicted RBP2.17□□□□□ -2.06
SEC16YPL085W KIN4Q01919 800 aa2.17□□□□□ -2.06
SEC16YPL085W EGD1Q02642 157 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W BER1Q06688 274 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W SRO7Q12038 1033 aa2.17□□□□□ -2.06
SEC16YPL085W RHO2P06781 192 aa2.17□□□□□ -2.06
SEC16YPL085W SCH9P11792 824 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W GAL3P13045 520 aa2.17□□□□□ -2.06
SEC16YPL085W REC107P21651 314 aa2.17□□□□□ -2.06
SEC16YPL085W STE50P25344 346 aa2.17□□□□□ -2.06
SEC16YPL085W FLO10P36170 1169 aa2.17□□□□□ -2.06
SEC16YPL085W SCO2P38072 301 aa2.17□□□□□ -2.06
SEC16YPL085W ATG7P38862 630 aa2.17□□□□□ -2.06
SEC16YPL085W YHR218WP38899 603 aa2.17□□□□□ -2.06
SEC16YPL085W NAS2P40555 220 aa2.17□□□□□ -2.06
SEC16YPL085W YGL176CP46945 554 aa2.17□□□□□ -2.06
SEC16YPL085W BOL2P53082 120 aa2.17□□□□□ -2.06
SEC16YPL085W MRM2P53123 320 aa2.17□□□□□ -2.06
SEC16YPL085W YGR283CP53336 341 aaPredicted RBP2.17□□□□□ -2.06
SEC16YPL085W YNR063WP53749 607 aa2.17□□□□□ -2.06
SEC16YPL085W SFB2P53953 876 aa2.17□□□□□ -2.06
SEC16YPL085W SRP1Q02821 542 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W PRM15Q03262 622 aa2.17□□□□□ -2.06
SEC16YPL085W YLR346CQ06139 101 aa2.17□□□□□ -2.06
SEC16YPL085W FLO1P32768 1537 aa2.17□□□□□ -2.06
SEC16YPL085W STE3P06783 470 aa2.17□□□□□ -2.06
SEC16YPL085W ARG80P07249 177 aa2.17□□□□□ -2.06
SEC16YPL085W CDC42P19073 191 aa2.17□□□□□ -2.06
SEC16YPL085W TSR4P25040 408 aa2.17□□□□□ -2.06
SEC16YPL085W IMG2P25642 146 aaPredicted RBP2.17□□□□□ -2.06
SEC16YPL085W KAP122P32767 1081 aa2.17□□□□□ -2.06
SEC16YPL085W TFB1P32776 642 aa2.17□□□□□ -2.06
SEC16YPL085W YKL063CP35725 167 aa2.17□□□□□ -2.06
SEC16YPL085W BIO5P53744 561 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W CWC24P53769 259 aa2.17□□□□□ -2.06
SEC16YPL085W CDC14Q00684 551 aa2.17□□□□□ -2.06
SEC16YPL085W YPL067CQ02754 198 aa2.17□□□□□ -2.06
SEC16YPL085W YDR131CQ03899 556 aa2.17□□□□□ -2.06
SEC16YPL085W MHF2Q3E829 80 aa2.17□□□□□ -2.06
SEC16YPL085W PRI2P20457 528 aa2.16□□□□□ -2.06
SEC16YPL085W PRE9P23638 258 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W AHC2P25649 128 aa2.16□□□□□ -2.06
SEC16YPL085W RFA3P26755 122 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W KNS1P32350 737 aaPredicted RBP2.16□□□□□ -2.06
SEC16YPL085W VID24P38263 362 aa2.16□□□□□ -2.06
SEC16YPL085W QDR2P40474 542 aa2.16□□□□□ -2.06
SEC16YPL085W UBP6P43593 499 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W MDM34P53083 459 aa2.16□□□□□ -2.06
SEC16YPL085W ERP6P53198 216 aa2.16□□□□□ -2.06
SEC16YPL085W ECM9Q02202 377 aa2.16□□□□□ -2.06
SEC16YPL085W URH1Q04179 340 aa2.16□□□□□ -2.06
SEC16YPL085W SEG1Q04279 960 aa2.16□□□□□ -2.06
SEC16YPL085W NAT4Q04751 285 aa2.16□□□□□ -2.06
SEC16YPL085W RDR1Q08904 546 aa2.16□□□□□ -2.06
SEC16YPL085W AFT2Q08957 416 aa2.16□□□□□ -2.06
SEC16YPL085W SUL2Q12325 893 aa2.16□□□□□ -2.06
SEC16YPL085W SCM3Q12334 223 aa2.16□□□□□ -2.06
SEC16YPL085W AI5_ALPHAQ9ZZX1 630 aa2.16□□□□□ -2.06
SEC16YPL085W COX9P07255 59 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms