RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	TY4A-H	Q6Q5P6	413 aa		11.22	□□□□□ -0.61
DED1	YOR204W	CAN1	P04817	590 aa		11.21	□□□□□ -0.61
DED1	YOR204W	HTA2	P04912	132 aa		11.21	□□□□□ -0.61
DED1	YOR204W	KAR1	P11927	433 aa		11.21	□□□□□ -0.61
DED1	YOR204W	FUN30	P31380	1131 aa		11.21	□□□□□ -0.61
DED1	YOR204W	ELO1	P39540	310 aa		11.21	□□□□□ -0.61
DED1	YOR204W	VRG4	P40107	337 aa		11.21	□□□□□ -0.61
DED1	YOR204W	GTO1	P48239	356 aa		11.21	□□□□□ -0.61
DED1	YOR204W	MIG2	P53035	382 aa		11.21	□□□□□ -0.61
DED1	YOR204W	ARC35	P53731	342 aa	Known RBP	11.21	□□□□□ -0.61
DED1	YOR204W	YML096W	Q04489	525 aa		11.21	□□□□□ -0.61
DED1	YOR204W	SNX3	Q08826	162 aa	Known RBP	11.21	□□□□□ -0.61
DED1	YOR204W	RNQ1	P25367	405 aa		11.21	□□□□□ -0.62
DED1	YOR204W	ZIP1	P31111	875 aa		11.21	□□□□□ -0.62
DED1	YOR204W	MAP2	P38174	421 aa	Known RBP	11.21	□□□□□ -0.62
DED1	YOR204W	FZO1	P38297	855 aa		11.21	□□□□□ -0.62
DED1	YOR204W	ATG7	P38862	630 aa		11.21	□□□□□ -0.62
DED1	YOR204W	MET30	P39014	640 aa		11.21	□□□□□ -0.62
DED1	YOR204W	FMP32	P43557	207 aa		11.21	□□□□□ -0.62
DED1	YOR204W	ACL4	Q03771	387 aa		11.21	□□□□□ -0.62
DED1	YOR204W	UAF30	Q08747	228 aa		11.21	□□□□□ -0.62
DED1	YOR204W	SNF5	P18480	905 aa		11.2	□□□□□ -0.62
DED1	YOR204W	ATO2	P32907	282 aa		11.2	□□□□□ -0.62
DED1	YOR204W	UTH1	P36135	365 aa		11.2	□□□□□ -0.62
DED1	YOR204W	YAL037W	P39728	267 aa		11.2	□□□□□ -0.62
DED1	YOR204W	YLR413W	Q06689	675 aa		11.2	□□□□□ -0.62
DED1	YOR204W	BMT6	Q12291	365 aa		11.2	□□□□□ -0.62
DED1	YOR204W	CSF1	Q12150	2958 aa		11.2	□□□□□ -0.62
DED1	YOR204W	AI3	P03877	415 aa		11.19	□□□□□ -0.62
DED1	YOR204W	ERG6	P25087	383 aa	Known RBP	11.19	□□□□□ -0.62
DED1	YOR204W	PHO91	P27514	894 aa		11.19	□□□□□ -0.62
DED1	YOR204W	RIM101	P33400	625 aa		11.19	□□□□□ -0.62
DED1	YOR204W	KKQ8	P36004	724 aa		11.19	□□□□□ -0.62
DED1	YOR204W	SUM1	P46676	1062 aa		11.19	□□□□□ -0.62
DED1	YOR204W	MPS3	P47069	682 aa		11.19	□□□□□ -0.62
DED1	YOR204W	ARE2	P53629	642 aa	Known RBP	11.19	□□□□□ -0.62
DED1	YOR204W	DYN3	Q04949	312 aa		11.19	□□□□□ -0.62
DED1	YOR204W	YHC1	Q05900	231 aa	Known RBP	11.19	□□□□□ -0.62
DED1	YOR204W	RKM5	Q12367	367 aa		11.19	□□□□□ -0.62
DED1	YOR204W	ACC1	Q00955	2233 aa	Known RBP	11.19	□□□□□ -0.62
DED1	YOR204W	SPS22	P25380	463 aa		11.19	□□□□□ -0.62
DED1	YOR204W	IDH2	P28241	369 aa	Known RBP	11.19	□□□□□ -0.62
DED1	YOR204W	NTR2	P36118	322 aa	Predicted RBP	11.19	□□□□□ -0.62
DED1	YOR204W	ARA1	P38115	344 aa		11.19	□□□□□ -0.62
DED1	YOR204W	MUM2	P38236	366 aa		11.19	□□□□□ -0.62
DED1	YOR204W	YBR071W	P38243	211 aa		11.19	□□□□□ -0.62
DED1	YOR204W	LYS1	P38998	373 aa	RIP-Chip data	11.19	□□□□□ -0.62	not detected
DED1	YOR204W	ASA1	Q06822	443 aa		11.19	□□□□□ -0.62
DED1	YOR204W	MCH5	Q08777	521 aa		11.19	□□□□□ -0.62
DED1	YOR204W	YOR114W	Q12219	294 aa		11.19	□□□□□ -0.62
DED1	YOR204W	CMP2	P14747	604 aa		11.18	□□□□□ -0.62
DED1	YOR204W	AGP1	P25376	633 aa		11.18	□□□□□ -0.62
DED1	YOR204W	RRN10	P38204	145 aa		11.18	□□□□□ -0.62
DED1	YOR204W	ALG5	P40350	334 aa		11.18	□□□□□ -0.62
DED1	YOR204W	MAM33	P40513	266 aa		11.18	□□□□□ -0.62
DED1	YOR204W	BIO3	P50277	480 aa		11.18	□□□□□ -0.62
DED1	YOR204W	FHN1	P53279	174 aa		11.18	□□□□□ -0.62
DED1	YOR204W	YNL140C	P53910	189 aa		11.18	□□□□□ -0.62
DED1	YOR204W	ECM11	Q04110	302 aa		11.18	□□□□□ -0.62
DED1	YOR204W	ATP6	P00854	259 aa		11.17	□□□□□ -0.62
DED1	YOR204W	RAS2	P01120	322 aa	Known RBP	11.17	□□□□□ -0.62
DED1	YOR204W	RDS2	P19541	446 aa	Known RBP	11.17	□□□□□ -0.62
DED1	YOR204W	MRPL17	P36528	281 aa		11.17	□□□□□ -0.62
DED1	YOR204W	YCR087C-A	P37263	153 aa		11.17	□□□□□ -0.62
DED1	YOR204W	COS111	P38308	924 aa		11.17	□□□□□ -0.62
DED1	YOR204W	LRO1	P40345	661 aa		11.17	□□□□□ -0.62
DED1	YOR204W	APQ12	P40532	138 aa		11.17	□□□□□ -0.62
DED1	YOR204W	AIM22	P47051	409 aa		11.17	□□□□□ -0.62
DED1	YOR204W	IDP3	P53982	420 aa	Known RBP	11.17	□□□□□ -0.62
DED1	YOR204W	BCP1	Q06338	283 aa		11.17	□□□□□ -0.62
DED1	YOR204W	TYR1	P20049	452 aa		11.16	□□□□□ -0.62
DED1	YOR204W	REC107	P21651	314 aa		11.16	□□□□□ -0.62
DED1	YOR204W	AAR2	P32357	355 aa	Predicted RBP	11.16	□□□□□ -0.62
DED1	YOR204W	DOM34	P33309	386 aa		11.16	□□□□□ -0.62
DED1	YOR204W	AYR1	P40471	297 aa		11.16	□□□□□ -0.62
DED1	YOR204W	RLP7	P40693	322 aa	Known RBP	11.16	□□□□□ -0.62
DED1	YOR204W	YMR010W	Q03687	405 aa		11.16	□□□□□ -0.62
DED1	YOR204W	ROY1	Q04847	553 aa		11.16	□□□□□ -0.62
DED1	YOR204W	RTK1	Q12100	620 aa	Predicted RBP	11.16	□□□□□ -0.62
DED1	YOR204W	YPR022C	Q12139	1133 aa		11.16	□□□□□ -0.62
DED1	YOR204W	ATP2	P00830	511 aa	Known RBP	11.16	□□□□□ -0.62
DED1	YOR204W	ARG3	P05150	338 aa		11.16	□□□□□ -0.62
DED1	YOR204W	RPL1A	P0CX43	217 aa	Known RBP	11.16	□□□□□ -0.62
DED1	YOR204W	RPL1B	P0CX44	217 aa	Known RBP	11.16	□□□□□ -0.62
DED1	YOR204W	RAD51	P25454	400 aa		11.16	□□□□□ -0.62
DED1	YOR204W	SFC1	P33303	322 aa		11.16	□□□□□ -0.62
DED1	YOR204W	FMP46	P36141	133 aa	Known RBP	11.16	□□□□□ -0.62
DED1	YOR204W	FTH1	P38310	465 aa		11.16	□□□□□ -0.62
DED1	YOR204W	YHR033W	P38690	423 aa		11.16	□□□□□ -0.62
DED1	YOR204W	AXL2	P38928	823 aa		11.16	□□□□□ -0.62
DED1	YOR204W	MET12	P46151	657 aa		11.16	□□□□□ -0.62
DED1	YOR204W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
DED1	YOR204W	MTR3	P48240	250 aa	Predicted RBP	11.16	□□□□□ -0.62
DED1	YOR204W	RHO3	Q00245	231 aa	Known RBP	11.16	□□□□□ -0.62
DED1	YOR204W	ATG26	Q06321	1198 aa		11.16	□□□□□ -0.62
DED1	YOR204W	YOL159C	Q08300	171 aa		11.16	□□□□□ -0.62
DED1	YOR204W	TPK2	P06245	380 aa		11.15	□□□□□ -0.62
DED1	YOR204W	PRI2	P20457	528 aa		11.15	□□□□□ -0.62
DED1	YOR204W	RPS0A	P32905	252 aa	Known RBP	11.15	□□□□□ -0.62
DED1	YOR204W	DMA1	P38823	416 aa		11.15	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms