RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W PRP2P20095 876 aaPredicted RBP3.81□□□□□ -1.8
VPS27YNR006W RPL32P38061 130 aaKnown RBP3.81□□□□□ -1.8
VPS27YNR006W ICS2P38284 255 aa3.81□□□□□ -1.8
VPS27YNR006W RFC3P38629 340 aa3.81□□□□□ -1.8
VPS27YNR006W YHR210CP38893 341 aa3.81□□□□□ -1.8
VPS27YNR006W ASG1P40467 964 aa3.81□□□□□ -1.8
VPS27YNR006W CIN1P40987 1014 aa3.81□□□□□ -1.8
VPS27YNR006W GCD14P46959 383 aaPredicted RBP3.81□□□□□ -1.8
VPS27YNR006W PRM1P53835 661 aa3.81□□□□□ -1.8
VPS27YNR006W HRD3Q05787 833 aa3.81□□□□□ -1.8
VPS27YNR006W ADE13Q05911 482 aaKnown RBP3.81□□□□□ -1.8
VPS27YNR006W MDM30Q05930 598 aa3.81□□□□□ -1.8
VPS27YNR006W YIL002W-AQ3E7Z5 69 aa3.81□□□□□ -1.8
VPS27YNR006W LAM4P38800 1345 aa3.8□□□□□ -1.8
VPS27YNR006W SAC3P46674 1301 aa3.8□□□□□ -1.8
VPS27YNR006W LEU4P06208 619 aaKnown RBP3.8□□□□□ -1.8
VPS27YNR006W PUT2P07275 575 aa3.8□□□□□ -1.8
VPS27YNR006W RIP1P08067 215 aa3.8□□□□□ -1.8
VPS27YNR006W CHO1P08456 276 aa3.8□□□□□ -1.8
VPS27YNR006W ABF1P14164 731 aa3.8□□□□□ -1.8
VPS27YNR006W RAD14P28519 371 aa3.8□□□□□ -1.8
VPS27YNR006W MCM4P30665 933 aaKnown RBP3.8□□□□□ -1.8
VPS27YNR006W APL3P38065 1025 aa3.8□□□□□ -1.8
VPS27YNR006W LAS21P40367 830 aa3.8□□□□□ -1.8
VPS27YNR006W PTR3P43606 678 aa3.8□□□□□ -1.8
VPS27YNR006W RPS10BP46784 105 aaKnown RBP3.8□□□□□ -1.8
VPS27YNR006W NMD5P46970 1048 aa3.8□□□□□ -1.8
VPS27YNR006W SMA1Q02651 245 aa3.8□□□□□ -1.8
VPS27YNR006W WAR1Q03631 944 aa3.8□□□□□ -1.8
VPS27YNR006W RRB1Q04225 511 aaKnown RBP3.8□□□□□ -1.8
VPS27YNR006W PLM2Q04383 521 aa3.8□□□□□ -1.8
VPS27YNR006W ARV1Q06541 321 aa3.8□□□□□ -1.8
VPS27YNR006W ETT1Q08421 412 aaKnown RBP3.8□□□□□ -1.8
VPS27YNR006W RKM1Q08961 583 aaPredicted RBP3.8□□□□□ -1.8
VPS27YNR006W TY3A-GQ12173 290 aa3.8□□□□□ -1.8
VPS27YNR006W NCE102Q12207 173 aaRIP-Chip data3.8□□□□□ -1.8not detected
VPS27YNR006W TY3A-IQ99219 290 aa3.8□□□□□ -1.8
VPS27YNR006W TDH1P00360 332 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W CDC37P06101 506 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W COR1P07256 457 aa3.79□□□□□ -1.8
VPS27YNR006W RNR3P21672 869 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W DMC1P25453 334 aa3.79□□□□□ -1.8
VPS27YNR006W KRE2P27809 442 aa3.79□□□□□ -1.8
VPS27YNR006W GAC1P28006 793 aa3.79□□□□□ -1.8
VPS27YNR006W ATP3P38077 311 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W MMS4P38257 691 aa3.79□□□□□ -1.8
VPS27YNR006W ARP1P38696 384 aa3.79□□□□□ -1.8
VPS27YNR006W CIN4P39110 191 aa3.79□□□□□ -1.8
VPS27YNR006W IAH1P41734 238 aa3.79□□□□□ -1.8
VPS27YNR006W PNC1P53184 216 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W COG2P53271 262 aa3.79□□□□□ -1.8
VPS27YNR006W YPR172WQ06608 200 aa3.79□□□□□ -1.8
VPS27YNR006W YOR012WQ12351 137 aa3.79□□□□□ -1.8
VPS27YNR006W GPH1P06738 902 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W ADE5,7P07244 802 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W PEP4P07267 405 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W PMR1P13586 950 aa3.79□□□□□ -1.8
VPS27YNR006W SEC63P14906 663 aa3.79□□□□□ -1.8
VPS27YNR006W SRV2P17555 526 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W RAD51P25454 400 aa3.79□□□□□ -1.8
VPS27YNR006W TPO5P36029 618 aa3.79□□□□□ -1.8
VPS27YNR006W RIX1P38883 763 aaPredicted RBP3.79□□□□□ -1.8
VPS27YNR006W MBB1P39534 108 aa3.79□□□□□ -1.8
VPS27YNR006W AIM20P40451 204 aa3.79□□□□□ -1.8
VPS27YNR006W ERG26P53199 349 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W ATG4P53867 494 aa3.79□□□□□ -1.8
VPS27YNR006W MUK1Q02866 612 aa3.79□□□□□ -1.8
VPS27YNR006W YMR206WQ03695 313 aa3.79□□□□□ -1.8
VPS27YNR006W EKI1Q03764 534 aa3.79□□□□□ -1.8
VPS27YNR006W RUD3Q12234 484 aaKnown RBP3.79□□□□□ -1.8
VPS27YNR006W PDE2P06776 526 aa3.78□□□□□ -1.8
VPS27YNR006W UNG1P12887 359 aa3.78□□□□□ -1.8
VPS27YNR006W ALG1P16661 449 aa3.78□□□□□ -1.8
VPS27YNR006W CNA1P23287 553 aa3.78□□□□□ -1.8
VPS27YNR006W SGV1P23293 657 aaKnown RBP3.78□□□□□ -1.8
VPS27YNR006W PET18P25362 215 aa3.78□□□□□ -1.8
VPS27YNR006W BEM1P29366 551 aa3.78□□□□□ -1.8
VPS27YNR006W RIM1P32445 135 aaKnown RBP3.78□□□□□ -1.8
VPS27YNR006W MTR2P34232 184 aaKnown RBP3.78□□□□□ -1.8
VPS27YNR006W PTK1P36002 662 aaPredicted RBP3.78□□□□□ -1.8
VPS27YNR006W DED81P38707 554 aaKnown RBP3.78□□□□□ -1.8
VPS27YNR006W PCL5P38794 229 aa3.78□□□□□ -1.8
VPS27YNR006W ANS1P38832 159 aa3.78□□□□□ -1.8
VPS27YNR006W CHS7P38843 316 aa3.78□□□□□ -1.8
VPS27YNR006W GPI16P38875 610 aa3.78□□□□□ -1.8
VPS27YNR006W YGL242CP53066 181 aa3.78□□□□□ -1.8
VPS27YNR006W DRN1P53255 507 aaKnown RBP3.78□□□□□ -1.8
VPS27YNR006W SMX3P54999 86 aaPredicted RBP3.78□□□□□ -1.8
VPS27YNR006W POS5Q06892 414 aa3.78□□□□□ -1.8
VPS27YNR006W MDM20Q12387 796 aaKnown RBP3.78□□□□□ -1.8
VPS27YNR006W SEC62P21825 274 aa3.77□□□□□ -1.81
VPS27YNR006W NTG1P31378 399 aa3.77□□□□□ -1.81
VPS27YNR006W SIN4P32259 974 aa3.77□□□□□ -1.81
VPS27YNR006W HMX1P32339 317 aa3.77□□□□□ -1.81
VPS27YNR006W GLG1P36143 616 aa3.77□□□□□ -1.81
VPS27YNR006W PMT6P42934 759 aa3.77□□□□□ -1.81
VPS27YNR006W RAD17P48581 401 aa3.77□□□□□ -1.81
VPS27YNR006W ROG1P53118 685 aa3.77□□□□□ -1.81
VPS27YNR006W YPR003CP53394 754 aa3.77□□□□□ -1.81
VPS27YNR006W YLR297WQ05899 129 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms