RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C YPR091CQ06833 770 aa3.24□□□□□ -1.89
SQS1YNL224C LUC7Q07508 261 aaPredicted RBP3.24□□□□□ -1.89
SQS1YNL224C MFG1Q07684 458 aa3.24□□□□□ -1.89
SQS1YNL224C LDB18Q07887 179 aa3.24□□□□□ -1.89
SQS1YNL224C GAS5Q08193 484 aa3.24□□□□□ -1.89
SQS1YNL224C RDR1Q08904 546 aa3.24□□□□□ -1.89
SQS1YNL224C GET3Q12154 354 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C UBX3Q12229 455 aa3.24□□□□□ -1.89
SQS1YNL224C RUP1Q12242 671 aa3.24□□□□□ -1.89
SQS1YNL224C Q0144Q9ZZW2 109 aa3.24□□□□□ -1.89
SQS1YNL224C PEP1P32319 1579 aa3.24□□□□□ -1.89
SQS1YNL224C MTF2P10849 440 aa3.24□□□□□ -1.89
SQS1YNL224C PYC1P11154 1178 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C CDC24P11433 854 aaPredicted RBP3.24□□□□□ -1.89
SQS1YNL224C HMG2P12684 1045 aa3.24□□□□□ -1.89
SQS1YNL224C PMR1P13586 950 aa3.24□□□□□ -1.89
SQS1YNL224C GCN3P14741 305 aa3.24□□□□□ -1.89
SQS1YNL224C HCM1P25364 564 aa3.24□□□□□ -1.89
SQS1YNL224C ADY2P25613 283 aa3.24□□□□□ -1.89
SQS1YNL224C RPS5P26783 225 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C LAC1P28496 418 aa3.24□□□□□ -1.89
SQS1YNL224C CAM1P29547 415 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C SAC1P32368 623 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C GSH1P32477 678 aa3.24□□□□□ -1.89
SQS1YNL224C SPS19P32573 292 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C PTK1P36002 662 aaPredicted RBP3.24□□□□□ -1.89
SQS1YNL224C HEK2P38199 381 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SQS1YNL224C VHC1P38329 1120 aa3.24□□□□□ -1.89
SQS1YNL224C BIT2P38346 545 aa3.24□□□□□ -1.89
SQS1YNL224C AKR1P39010 764 aa3.24□□□□□ -1.89
SQS1YNL224C DLD3P39976 496 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C CHS6P40955 746 aa3.24□□□□□ -1.89
SQS1YNL224C CCC1P47818 322 aa3.24□□□□□ -1.89
SQS1YNL224C CTH1P47976 325 aa3.24□□□□□ -1.89
SQS1YNL224C CLA4P48562 842 aa3.24□□□□□ -1.89
SQS1YNL224C CUE3P53137 624 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C VPS75P53853 264 aa3.24□□□□□ -1.89
SQS1YNL224C DIG1Q03063 452 aaKnown RBP3.24□□□□□ -1.89
SQS1YNL224C PLB2Q03674 706 aa3.24□□□□□ -1.89
SQS1YNL224C GIS1Q03833 894 aa3.24□□□□□ -1.89
SQS1YNL224C HIM1Q06674 414 aa3.24□□□□□ -1.89
SQS1YNL224C YPR078CQ06813 372 aa3.24□□□□□ -1.89
SQS1YNL224C BDS1Q08347 646 aa3.24□□□□□ -1.89
SQS1YNL224C UAF30Q08747 228 aa3.24□□□□□ -1.89
SQS1YNL224C YPL272CQ08984 517 aa3.24□□□□□ -1.89
SQS1YNL224C YDL176WQ12027 708 aa3.24□□□□□ -1.89
SQS1YNL224C CWC2Q12046 339 aaPredicted RBP3.24□□□□□ -1.89
SQS1YNL224C RTK1Q12100 620 aaPredicted RBP3.24□□□□□ -1.89
SQS1YNL224C HUA2Q12134 243 aa3.24□□□□□ -1.89
SQS1YNL224C YOL107WQ12239 342 aa3.24□□□□□ -1.89
SQS1YNL224C VPS63O13549 108 aa3.23□□□□□ -1.89
SQS1YNL224C PRC1P00729 532 aa3.23□□□□□ -1.89
SQS1YNL224C MSF1P08425 469 aa3.23□□□□□ -1.89
SQS1YNL224C RPL1AP0CX43 217 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C RPL1BP0CX44 217 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C RPL19AP0CX82 189 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C RPL19BP0CX83 189 aaPredicted RBP3.23□□□□□ -1.89
SQS1YNL224C RPL4AP10664 362 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C YPK1P12688 680 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C SAC7P17121 654 aa3.23□□□□□ -1.89
SQS1YNL224C RPO26P20435 155 aa3.23□□□□□ -1.89
SQS1YNL224C CNA1P23287 553 aa3.23□□□□□ -1.89
SQS1YNL224C FAA1P30624 700 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C CCR4P31384 837 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C ATP11P32453 318 aa3.23□□□□□ -1.89
SQS1YNL224C YBL055CP34220 418 aaPredicted RBP3.23□□□□□ -1.89
SQS1YNL224C LST4P34239 828 aa3.23□□□□□ -1.89
SQS1YNL224C CSG2P35206 410 aa3.23□□□□□ -1.89
SQS1YNL224C RCN1P36054 211 aa3.23□□□□□ -1.89
SQS1YNL224C SHM1P37292 490 aaPredicted RBP3.23□□□□□ -1.89
SQS1YNL224C STB5P38699 743 aa3.23□□□□□ -1.89
SQS1YNL224C RRP3P38712 501 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C BIG1P38813 335 aa3.23□□□□□ -1.89
SQS1YNL224C RPN3P40016 523 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C FAU1P40099 211 aa3.23□□□□□ -1.89
SQS1YNL224C LSM8P47093 109 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C RPL4BP49626 362 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C PSP1P50896 841 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C COG1P53079 417 aa3.23□□□□□ -1.89
SQS1YNL224C YGL159WP53110 370 aa3.23□□□□□ -1.89
SQS1YNL224C NOG2P53742 486 aaKnown RBP3.23□□□□□ -1.89
SQS1YNL224C YNL181WP53878 407 aa3.23□□□□□ -1.89
SQS1YNL224C DID2P69771 204 aa3.23□□□□□ -1.89
SQS1YNL224C YDR476CQ03362 224 aa3.23□□□□□ -1.89
SQS1YNL224C PEX12Q04370 399 aa3.23□□□□□ -1.89
SQS1YNL224C SFH1Q06168 426 aa3.23□□□□□ -1.89
SQS1YNL224C SSK1Q07084 712 aa3.23□□□□□ -1.89
SQS1YNL224C RTT109Q07794 436 aa3.23□□□□□ -1.89
SQS1YNL224C SKI7Q08491 747 aaPredicted RBP3.23□□□□□ -1.89
SQS1YNL224C BUD4P47136 1447 aa3.23□□□□□ -1.89
SQS1YNL224C ATP6P00854 259 aa3.22□□□□□ -1.89
SQS1YNL224C URA6P15700 204 aa3.22□□□□□ -1.89
SQS1YNL224C POL30P15873 258 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C PHO81P17442 1178 aa3.22□□□□□ -1.89
SQS1YNL224C ESS1P22696 170 aa3.22□□□□□ -1.89
SQS1YNL224C GSY1P23337 708 aa3.22□□□□□ -1.89
SQS1YNL224C ERV1P27882 189 aa3.22□□□□□ -1.89
SQS1YNL224C CAP1P28495 268 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C CDC13P32797 924 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C IMP3P32899 183 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms