RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W MSS51P32335 436 aa1.96□□□□□ -2.1
CFT2YLR115W EFB1P32471 206 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W SCO2P38072 301 aa1.96□□□□□ -2.1
CFT2YLR115W SIF2P38262 535 aa1.96□□□□□ -2.1
CFT2YLR115W IFA38P38286 347 aa1.96□□□□□ -2.1
CFT2YLR115W YND1P40009 630 aa1.96□□□□□ -2.1
CFT2YLR115W PCL6P40038 420 aa1.96□□□□□ -2.1
CFT2YLR115W FMP10P40098 244 aa1.96□□□□□ -2.1
CFT2YLR115W ASG1P40467 964 aa1.96□□□□□ -2.1
CFT2YLR115W CAB2P40506 365 aa1.96□□□□□ -2.1
CFT2YLR115W EMC2P47133 292 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W IMA1P53051 589 aa1.96□□□□□ -2.1
CFT2YLR115W EFM5P53200 248 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W TOF1P53840 1238 aa1.96□□□□□ -2.1
CFT2YLR115W VPS75P53853 264 aa1.96□□□□□ -2.1
CFT2YLR115W YNL144CP53907 740 aa1.96□□□□□ -2.1
CFT2YLR115W YDR109CQ04585 715 aa1.96□□□□□ -2.1
CFT2YLR115W NOP6Q07623 225 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W RIX7Q07844 837 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W MCH4Q08268 501 aa1.96□□□□□ -2.1
CFT2YLR115W CTI6Q08923 506 aa1.96□□□□□ -2.1
CFT2YLR115W TRM8Q12009 286 aa1.96□□□□□ -2.1
CFT2YLR115W YLR112WQ12130 139 aa1.96□□□□□ -2.1
CFT2YLR115W RVB2Q12464 471 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W YML133CQ03099 1374 aa1.95□□□□□ -2.1
CFT2YLR115W YLL067CQ07888 1374 aa1.95□□□□□ -2.1
CFT2YLR115W YLL066CQ99208 1374 aa1.95□□□□□ -2.1
CFT2YLR115W YER145C-AA0A023PYF4 145 aa1.95□□□□□ -2.1
CFT2YLR115W NCP1P16603 691 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W CDC42P19073 191 aa1.95□□□□□ -2.1
CFT2YLR115W PHO91P27514 894 aa1.95□□□□□ -2.1
CFT2YLR115W YEL043WP32618 956 aa1.95□□□□□ -2.1
CFT2YLR115W SUR1P33300 382 aa1.95□□□□□ -2.1
CFT2YLR115W COY1P34237 679 aa1.95□□□□□ -2.1
CFT2YLR115W YKT6P36015 200 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W FLC2P39719 783 aa1.95□□□□□ -2.1
CFT2YLR115W FUN12P39730 1002 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W YAT2P40017 923 aa1.95□□□□□ -2.1
CFT2YLR115W YJL070CP40361 888 aa1.95□□□□□ -2.1
CFT2YLR115W DOT5P40553 215 aa1.95□□□□□ -2.1
CFT2YLR115W IST3P40565 148 aaPredicted RBP1.95□□□□□ -2.1
CFT2YLR115W DSD1P53095 428 aa1.95□□□□□ -2.1
CFT2YLR115W MLC1P53141 149 aa1.95□□□□□ -2.1
CFT2YLR115W RRP46P53256 223 aaPredicted RBP1.95□□□□□ -2.1
CFT2YLR115W LSB1P53281 241 aa1.95□□□□□ -2.1
CFT2YLR115W ARE2P53629 642 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W MPP6P53725 186 aaPredicted RBP1.95□□□□□ -2.1
CFT2YLR115W YPL108WQ02872 168 aaPredicted RBP1.95□□□□□ -2.1
CFT2YLR115W ATG21Q02887 496 aa1.95□□□□□ -2.1
CFT2YLR115W TFC6Q06339 672 aa1.95□□□□□ -2.1
CFT2YLR115W VAC14Q06708 880 aa1.95□□□□□ -2.1
CFT2YLR115W SPE3Q12074 293 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W COX17Q12287 69 aa1.95□□□□□ -2.1
CFT2YLR115W GPM3Q12326 303 aa1.95□□□□□ -2.1
CFT2YLR115W SKS1Q12505 502 aa1.95□□□□□ -2.1
CFT2YLR115W AFI1Q99222 893 aa1.95□□□□□ -2.1
CFT2YLR115W YLR278CQ05854 1341 aa1.95□□□□□ -2.1
CFT2YLR115W YML003WP0CF16 290 aa1.95□□□□□ -2.1
CFT2YLR115W PET123P17558 318 aa1.95□□□□□ -2.1
CFT2YLR115W YCR006CP25350 157 aa1.95□□□□□ -2.1
CFT2YLR115W YCR051WP25631 222 aa1.95□□□□□ -2.1
CFT2YLR115W POT1P27796 417 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
CFT2YLR115W CBF5P33322 483 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
CFT2YLR115W MNN2P38069 597 aa1.95□□□□□ -2.1
CFT2YLR115W EFM2P38347 419 aa1.95□□□□□ -2.1
CFT2YLR115W YIL169CP40442 995 aa1.95□□□□□ -2.1
CFT2YLR115W EFM4P40516 257 aa1.95□□□□□ -2.1
CFT2YLR115W ARC1P46672 376 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W CUE3P53137 624 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W HOP2P53187 214 aa1.95□□□□□ -2.1
CFT2YLR115W DCP2P53550 970 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W ADE16P54113 591 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W DIG1Q03063 452 aaKnown RBP1.95□□□□□ -2.1
CFT2YLR115W HOT1Q03213 719 aa1.95□□□□□ -2.1
CFT2YLR115W DON1Q05610 365 aa1.95□□□□□ -2.1
CFT2YLR115W STP3Q05937 343 aa1.95□□□□□ -2.1
CFT2YLR115W NRT1Q08485 598 aa1.95□□□□□ -2.1
CFT2YLR115W DCI1Q08558 271 aa1.95□□□□□ -2.1
CFT2YLR115W TCO89Q08921 799 aa1.95□□□□□ -2.1
CFT2YLR115W VPS54Q12071 889 aa1.95□□□□□ -2.1
CFT2YLR115W YOR019WQ99248 730 aa1.95□□□□□ -2.1
CFT2YLR115W CAT8P39113 1433 aa1.94□□□□□ -2.1
CFT2YLR115W GCN1P33892 2672 aaKnown RBP1.94□□□□□ -2.1
CFT2YLR115W PRP2P20095 876 aaPredicted RBP1.94□□□□□ -2.1
CFT2YLR115W RFA2P26754 273 aaKnown RBP1.94□□□□□ -2.1
CFT2YLR115W ARP2P32381 391 aaKnown RBP1.94□□□□□ -2.1
CFT2YLR115W MRE11P32829 692 aa1.94□□□□□ -2.1
CFT2YLR115W SRB2P34162 210 aa1.94□□□□□ -2.1
CFT2YLR115W KKQ8P36004 724 aa1.94□□□□□ -2.1
CFT2YLR115W CCT4P39078 528 aaKnown RBP1.94□□□□□ -2.1
CFT2YLR115W UTP18P40362 594 aaPredicted RBP1.94□□□□□ -2.1
CFT2YLR115W MRX6P48564 524 aa1.94□□□□□ -2.1
CFT2YLR115W YGR266WP53326 701 aa1.94□□□□□ -2.1
CFT2YLR115W TOF2Q02208 771 aa1.94□□□□□ -2.1
CFT2YLR115W SMA1Q02651 245 aa1.94□□□□□ -2.1
CFT2YLR115W ATC1Q04005 294 aa1.94□□□□□ -2.1
CFT2YLR115W YTH1Q06102 208 aaPredicted RBP1.94□□□□□ -2.1
CFT2YLR115W YLR345WQ06137 509 aa1.94□□□□□ -2.1
CFT2YLR115W YLR455WQ06188 304 aa1.94□□□□□ -2.1
CFT2YLR115W ARR1Q06596 294 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms