RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C FUN19P28003 413 aaPredicted RBP2.65□□□□□ -1.99
AFB1YLR040C PAP1P29468 568 aaKnown RBP2.65□□□□□ -1.99
AFB1YLR040C YME1P32795 747 aa2.65□□□□□ -1.99
AFB1YLR040C MRE11P32829 692 aa2.65□□□□□ -1.99
AFB1YLR040C MUM2P38236 366 aa2.65□□□□□ -1.99
AFB1YLR040C YMR147WP40218 223 aaKnown RBP2.65□□□□□ -1.99
AFB1YLR040C MET28P40573 187 aa2.65□□□□□ -1.99
AFB1YLR040C YPI1P43587 155 aa2.65□□□□□ -1.99
AFB1YLR040C GWT1P47026 490 aa2.65□□□□□ -1.99
AFB1YLR040C YGR066CP53242 292 aa2.65□□□□□ -1.99
AFB1YLR040C MSO1P53604 210 aaKnown RBP2.65□□□□□ -1.99
AFB1YLR040C FIN1Q03898 291 aa2.65□□□□□ -1.99
AFB1YLR040C MFB1Q04922 465 aa2.65□□□□□ -1.99
AFB1YLR040C IMH1Q06704 911 aaKnown RBP2.65□□□□□ -1.99
AFB1YLR040C YER078W-AQ3E7A2 54 aa2.65□□□□□ -1.99
AFB1YLR040C DFR1P07807 211 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
AFB1YLR040C CHS1P08004 1131 aa2.64□□□□□ -1.99
AFB1YLR040C BUB3P26449 341 aa2.64□□□□□ -1.99
AFB1YLR040C ATP11P32453 318 aa2.64□□□□□ -1.99
AFB1YLR040C SYG1P40528 902 aa2.64□□□□□ -1.99
AFB1YLR040C PET130P47065 347 aa2.64□□□□□ -1.99
AFB1YLR040C CAF130P53280 1122 aaPredicted RBP2.64□□□□□ -1.99
AFB1YLR040C ARK1P53974 638 aa2.64□□□□□ -1.99
AFB1YLR040C SLG1P54867 378 aa2.64□□□□□ -1.99
AFB1YLR040C FOB1O13329 566 aa2.63□□□□□ -1.99
AFB1YLR040C GCN4P03069 281 aa2.63□□□□□ -1.99
AFB1YLR040C RPL31BP0C2H9 113 aaKnown RBP2.63□□□□□ -1.99
AFB1YLR040C EXO70P19658 623 aa2.63□□□□□ -1.99
AFB1YLR040C FRE2P36033 711 aa2.63□□□□□ -1.99
AFB1YLR040C ERP2P39704 215 aa2.63□□□□□ -1.99
AFB1YLR040C FAU1P40099 211 aa2.63□□□□□ -1.99
AFB1YLR040C GCD10P41814 478 aa2.63□□□□□ -1.99
AFB1YLR040C AVT4P50944 713 aa2.63□□□□□ -1.99
AFB1YLR040C YDR239CQ03780 787 aa2.63□□□□□ -1.99
AFB1YLR040C RRD2Q12461 358 aa2.63□□□□□ -1.99
AFB1YLR040C LPD1P09624 499 aaKnown RBP2.62□□□□□ -1.99
AFB1YLR040C CPR1P14832 162 aaKnown RBP2.62□□□□□ -1.99
AFB1YLR040C HSC82P15108 705 aaKnown RBP2.62□□□□□ -1.99
AFB1YLR040C NOP1P15646 327 aaKnown RBP2.62□□□□□ -1.99
AFB1YLR040C IMP2'P32351 346 aa2.62□□□□□ -1.99
AFB1YLR040C SPO22P40511 975 aa2.62□□□□□ -1.99
AFB1YLR040C POP1P41812 875 aa2.62□□□□□ -1.99
AFB1YLR040C ELP2P42935 788 aa2.62□□□□□ -1.99
AFB1YLR040C ART5P53244 586 aaKnown RBP2.62□□□□□ -1.99
AFB1YLR040C PIR3Q03180 325 aa2.62□□□□□ -1.99
AFB1YLR040C TAP42Q04372 366 aa2.62□□□□□ -1.99
AFB1YLR040C YDL007C-AQ2V2Q0 85 aa2.62□□□□□ -1.99
AFB1YLR040C HIP1P06775 603 aa2.61□□□□□ -1.99
AFB1YLR040C MRP4P32902 394 aa2.61□□□□□ -1.99
AFB1YLR040C MFT1P33441 392 aaKnown RBP2.61□□□□□ -1.99
AFB1YLR040C PMT1P33775 817 aa2.61□□□□□ -1.99
AFB1YLR040C CST26P38226 397 aa2.61□□□□□ -1.99
AFB1YLR040C RFS1P38234 210 aaKnown RBP2.61□□□□□ -1.99
AFB1YLR040C YBP1P38315 674 aa2.61□□□□□ -1.99
AFB1YLR040C RRT5P43607 289 aa2.61□□□□□ -1.99
AFB1YLR040C TIM10P87108 93 aa2.61□□□□□ -1.99
AFB1YLR040C PDS5Q04264 1277 aa2.61□□□□□ -1.99
AFB1YLR040C YDL121CQ07541 149 aa2.61□□□□□ -1.99
AFB1YLR040C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
AFB1YLR040C SEC39Q12745 709 aa2.61□□□□□ -1.99
AFB1YLR040C RAV1P47104 1357 aa2.61□□□□□ -1.99
AFB1YLR040C ARG3P05150 338 aa2.6□□□□□ -1.99
AFB1YLR040C REV1P12689 985 aa2.6□□□□□ -1.99
AFB1YLR040C NDI1P32340 513 aa2.6□□□□□ -1.99
AFB1YLR040C GLC7P32598 312 aaKnown RBP2.6□□□□□ -1.99
AFB1YLR040C THI2P38141 450 aa2.6□□□□□ -1.99
AFB1YLR040C MKT1P40850 830 aaKnown RBP2.6□□□□□ -1.99
AFB1YLR040C KTR5P53966 522 aaPredicted RBP2.6□□□□□ -1.99
AFB1YLR040C RPT6Q01939 405 aaKnown RBP2.6□□□□□ -1.99
AFB1YLR040C SMA2Q04658 369 aa2.6□□□□□ -1.99
AFB1YLR040C MRD1Q06106 887 aaKnown RBP2.6□□□□□ -1.99
AFB1YLR040C YOR387CQ08910 206 aa2.6□□□□□ -1.99
AFB1YLR040C MED1Q12321 566 aa2.6□□□□□ -1.99
AFB1YLR040C BRR1Q99177 341 aaPredicted RBP2.6□□□□□ -1.99
AFB1YLR040C SWH1P35845 1188 aa2.59□□□□□ -1.99
AFB1YLR040C ISC1P40015 477 aaKnown RBP2.59□□□□□ -1.99
AFB1YLR040C YIL067CP40514 678 aa2.59□□□□□ -1.99
AFB1YLR040C RMD8P43620 662 aa2.59□□□□□ -1.99
AFB1YLR040C TRS85P46944 698 aa2.59□□□□□ -1.99
AFB1YLR040C OCA1P50946 238 aaPredicted RBP2.59□□□□□ -1.99
AFB1YLR040C YGL108CP53139 140 aa2.59□□□□□ -1.99
AFB1YLR040C TWF1P53250 332 aa2.59□□□□□ -1.99
AFB1YLR040C HEM15P16622 393 aa2.58□□□□□ -2
AFB1YLR040C OCA4P25366 362 aa2.58□□□□□ -2
AFB1YLR040C YCR100CP25606 316 aa2.58□□□□□ -2
AFB1YLR040C NAM9P27929 486 aa2.58□□□□□ -2
AFB1YLR040C RSM22P36056 628 aa2.58□□□□□ -2
AFB1YLR040C VMA13P41807 478 aaKnown RBP2.58□□□□□ -2
AFB1YLR040C URB2P47108 1174 aa2.58□□□□□ -2
AFB1YLR040C GOR1P53839 350 aa2.58□□□□□ -2
AFB1YLR040C BUD21Q08492 214 aaPredicted RBP2.58□□□□□ -2
AFB1YLR040C THP3Q12049 470 aaKnown RBP2.58□□□□□ -2
AFB1YLR040C ERV2Q12284 196 aa2.58□□□□□ -2
AFB1YLR040C LEU4P06208 619 aaKnown RBP2.57□□□□□ -2
AFB1YLR040C ATP10P18496 279 aa2.57□□□□□ -2
AFB1YLR040C LDB16P25587 256 aa2.57□□□□□ -2
AFB1YLR040C YIM1P28625 365 aa2.57□□□□□ -2
AFB1YLR040C SEC66P33754 206 aa2.57□□□□□ -2
AFB1YLR040C CMC1P36064 111 aa2.57□□□□□ -2
AFB1YLR040C NAT2P37293 288 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms