RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE1	YLR007W	INA17	Q02888	182 aa		4.4	□□□□□ -1.71
NSE1	YLR007W	KAP95	Q06142	861 aa	Known RBP	4.4	□□□□□ -1.71
NSE1	YLR007W	YLR413W	Q06689	675 aa		4.4	□□□□□ -1.71
NSE1	YLR007W	RRT8	Q08219	342 aa		4.4	□□□□□ -1.71
NSE1	YLR007W	MCH4	Q08268	501 aa		4.4	□□□□□ -1.71
NSE1	YLR007W	UBX3	Q12229	455 aa		4.4	□□□□□ -1.71
NSE1	YLR007W	SRV2	P17555	526 aa	Known RBP	4.39	□□□□□ -1.71
NSE1	YLR007W	DAP2	P18962	818 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	RPB4	P20433	221 aa	Predicted RBP	4.39	□□□□□ -1.71
NSE1	YLR007W	MRPL25	P23369	157 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	VMA16	P23968	213 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	BUD5	P25300	642 aa	Predicted RBP	4.39	□□□□□ -1.71
NSE1	YLR007W	YME2	P32843	850 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	DED81	P38707	554 aa	Known RBP	4.39	□□□□□ -1.71
NSE1	YLR007W	ANS1	P38832	159 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	YIL024C	P40543	189 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	HXT9	P40885	567 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	ABZ2	Q03266	374 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	INP2	Q03824	705 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	SEG1	Q04279	960 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	ADE13	Q05911	482 aa	Known RBP	4.39	□□□□□ -1.71
NSE1	YLR007W	RPS10A	Q08745	105 aa	Predicted RBP	4.39	□□□□□ -1.71
NSE1	YLR007W	LEU9	Q12166	604 aa	Known RBP	4.39	□□□□□ -1.71
NSE1	YLR007W	RRI1	Q12468	440 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	RAD61	Q99359	647 aa		4.39	□□□□□ -1.71
NSE1	YLR007W	HIP1	P06775	603 aa		4.38	□□□□□ -1.71
NSE1	YLR007W	LPD1	P09624	499 aa	Known RBP	4.38	□□□□□ -1.71
NSE1	YLR007W	GCD2	P12754	651 aa	Predicted RBP	4.38	□□□□□ -1.71
NSE1	YLR007W	LEU5	P38702	357 aa		4.38	□□□□□ -1.71
NSE1	YLR007W	CCT6	P39079	546 aa		4.38	□□□□□ -1.71
NSE1	YLR007W	ALD5	P40047	520 aa	Known RBP	4.38	□□□□□ -1.71
NSE1	YLR007W	RPS10B	P46784	105 aa	Known RBP	4.38	□□□□□ -1.71
NSE1	YLR007W	STR3	P53101	465 aa	Known RBP	4.38	□□□□□ -1.71
NSE1	YLR007W	GIM3	P53900	129 aa		4.38	□□□□□ -1.71
NSE1	YLR007W	SMA1	Q02651	245 aa		4.38	□□□□□ -1.71
NSE1	YLR007W	RPN9	Q04062	393 aa	Known RBP	4.38	□□□□□ -1.71
NSE1	YLR007W	FMP40	Q08968	688 aa	Predicted RBP	4.38	□□□□□ -1.71
NSE1	YLR007W	YLR112W	Q12130	139 aa		4.38	□□□□□ -1.71
NSE1	YLR007W	STE2	D6VTK4	431 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	ARD1	P07347	238 aa	Predicted RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	RPL42A	P0CX27	106 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	RPL42B	P0CX28	106 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	MRP2	P10663	115 aa	Predicted RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	PDA1	P16387	420 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	PRP2	P20095	876 aa	Predicted RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	CNA1	P23287	553 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	VPS3	P23643	1011 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	CRM1	P30822	1084 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	AFG1	P32317	509 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	MSS51	P32335	436 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	SMY1	P32364	656 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	SPC110	P32380	944 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	DPH5	P32469	300 aa	Predicted RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	YBL055C	P34220	418 aa	Predicted RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	YKT6	P36015	200 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	NTC20	P38302	140 aa	Predicted RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	YMR124W	P39523	943 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	ALG5	P40350	334 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	ULP2	P40537	1034 aa	Predicted RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	VMA13	P41807	478 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	SNO3	P43544	222 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	YFR018C	P43599	363 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	BNA3	P47039	444 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	IRC8	P47046	822 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	APT1	P49435	187 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	RMD9	P53140	646 aa	Known RBP	4.37	□□□□□ -1.71
NSE1	YLR007W	PRM1	P53835	661 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	BOP3	P53958	396 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	ECM18	Q04623	453 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	ORM2	Q06144	216 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	UAF30	Q08747	228 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	AEP3	Q12089	606 aa		4.37	□□□□□ -1.71
NSE1	YLR007W	TDH1	P00360	332 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	CBP2	P03874	630 aa	Predicted RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	MSS116	P15424	664 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	MCM4	P30665	933 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	HMX1	P32339	317 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	PDB1	P32473	366 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	TCD2	P36101	447 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	MRPL4	P36517	319 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	PEX18	P38855	283 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	AIM10	P39965	576 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	YIL060W	P40519	144 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	YGR149W	P48236	432 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	YGL138C	P53122	345 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	CGR1	P53188	120 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	MPP6	P53725	186 aa	Predicted RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	YNL143C	P53908	130 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	RPL15B	P54780	204 aa	Predicted RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	RRP45	Q05636	305 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	MDM36	Q06820	579 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	TSR1	Q07381	788 aa	Known RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	YAP7	Q08182	245 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	YLR049C	Q12110	428 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	INP53	Q12271	1107 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	ICT1	Q12385	394 aa		4.36	□□□□□ -1.71
NSE1	YLR007W	MRPL23	Q12487	163 aa	Predicted RBP	4.36	□□□□□ -1.71
NSE1	YLR007W	PDE2	P06776	526 aa		4.35	□□□□□ -1.71
NSE1	YLR007W	MRP13	P12686	339 aa		4.35	□□□□□ -1.71
NSE1	YLR007W	ARO3	P14843	370 aa	Known RBP	4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms