RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W CRT10Q08226 957 aa4.34□□□□□ -1.71
SOF1YLL011W MRH1Q12117 320 aaPredicted RBP4.34□□□□□ -1.71
SOF1YLL011W DFG16Q99234 619 aa4.34□□□□□ -1.71
SOF1YLL011W PDR11P40550 1411 aa4.34□□□□□ -1.71
SOF1YLL011W CBP1P07252 654 aa4.33□□□□□ -1.72
SOF1YLL011W PET111P08468 800 aa4.33□□□□□ -1.72
SOF1YLL011W STE4P18851 423 aa4.33□□□□□ -1.72
SOF1YLL011W BOS1P25385 244 aa4.33□□□□□ -1.72
SOF1YLL011W RRP1P35178 278 aaPredicted RBP4.33□□□□□ -1.72
SOF1YLL011W ARA1P38115 344 aa4.33□□□□□ -1.72
SOF1YLL011W MMS4P38257 691 aa4.33□□□□□ -1.72
SOF1YLL011W SMC2P38989 1170 aaKnown RBP4.33□□□□□ -1.72
SOF1YLL011W SAP1P39955 897 aaKnown RBP4.33□□□□□ -1.72
SOF1YLL011W VHS2P40463 436 aa4.33□□□□□ -1.72
SOF1YLL011W EFM3P47163 339 aa4.33□□□□□ -1.72
SOF1YLL011W YGR266WP53326 701 aa4.33□□□□□ -1.72
SOF1YLL011W PRM1P53835 661 aa4.33□□□□□ -1.72
SOF1YLL011W OCA2P53949 197 aa4.33□□□□□ -1.72
SOF1YLL011W UTP6Q02354 440 aaKnown RBP4.33□□□□□ -1.72
SOF1YLL011W EGD1Q02642 157 aaKnown RBP4.33□□□□□ -1.72
SOF1YLL011W DIS3Q08162 1001 aaKnown RBP4.33□□□□□ -1.72
SOF1YLL011W RRT8Q08219 342 aa4.33□□□□□ -1.72
SOF1YLL011W SLK19Q08581 821 aaKnown RBP4.33□□□□□ -1.72
SOF1YLL011W VAM3Q12241 283 aa4.33□□□□□ -1.72
SOF1YLL011W RAD61Q99359 647 aa4.33□□□□□ -1.72
SOF1YLL011W LAM4P38800 1345 aa4.33□□□□□ -1.72
SOF1YLL011W CBP2P03874 630 aaPredicted RBP4.32□□□□□ -1.72
SOF1YLL011W SPS4P09937 338 aa4.32□□□□□ -1.72
SOF1YLL011W PRP2P20095 876 aaPredicted RBP4.32□□□□□ -1.72
SOF1YLL011W HIR2P32480 875 aa4.32□□□□□ -1.72
SOF1YLL011W VBA2P38358 474 aaKnown RBP4.32□□□□□ -1.72
SOF1YLL011W SPT8P38915 602 aa4.32□□□□□ -1.72
SOF1YLL011W BFR1P38934 470 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72 RIP-Chip
SOF1YLL011W GIP4P39732 760 aa4.32□□□□□ -1.72
SOF1YLL011W LAS21P40367 830 aa4.32□□□□□ -1.72
SOF1YLL011W OPT1P40897 799 aa4.32□□□□□ -1.72
SOF1YLL011W YFR018CP43599 363 aa4.32□□□□□ -1.72
SOF1YLL011W COG2P53271 262 aa4.32□□□□□ -1.72
SOF1YLL011W VPS20Q04272 221 aa4.32□□□□□ -1.72
SOF1YLL011W PLM2Q04383 521 aa4.32□□□□□ -1.72
SOF1YLL011W KAP95Q06142 861 aaKnown RBP4.32□□□□□ -1.72
SOF1YLL011W MED2Q12124 431 aa4.32□□□□□ -1.72
SOF1YLL011W MRPL23Q12487 163 aaPredicted RBP4.32□□□□□ -1.72
SOF1YLL011W MTR10Q99189 972 aa4.32□□□□□ -1.72
SOF1YLL011W KRE5P22023 1365 aa4.32□□□□□ -1.72
SOF1YLL011W VPS63O13549 108 aa4.31□□□□□ -1.72
SOF1YLL011W CAR1P00812 333 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W ILV5P06168 395 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W SCH9P11792 824 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W SPE2P21182 396 aa4.31□□□□□ -1.72
SOF1YLL011W RNR3P21672 869 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W GAC1P28006 793 aa4.31□□□□□ -1.72
SOF1YLL011W RAD14P28519 371 aa4.31□□□□□ -1.72
SOF1YLL011W NDI1P32340 513 aa4.31□□□□□ -1.72
SOF1YLL011W YKR073CP36153 106 aa4.31□□□□□ -1.72
SOF1YLL011W RPL32P38061 130 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W HSM3P38348 480 aa4.31□□□□□ -1.72
SOF1YLL011W PHM8P40025 321 aa4.31□□□□□ -1.72
SOF1YLL011W RPN11P43588 306 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W RPA34P47006 233 aaPredicted RBP4.31□□□□□ -1.72
SOF1YLL011W AIM22P47051 409 aa4.31□□□□□ -1.72
SOF1YLL011W BUL1P48524 976 aa4.31□□□□□ -1.72
SOF1YLL011W YIP5P53108 310 aa4.31□□□□□ -1.72
SOF1YLL011W COQ6P53318 479 aa4.31□□□□□ -1.72
SOF1YLL011W COP1P53622 1201 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W MSC1Q03104 513 aa4.31□□□□□ -1.72
SOF1YLL011W CWC21Q03375 135 aaKnown RBP4.31□□□□□ -1.72
SOF1YLL011W ECM18Q04623 453 aa4.31□□□□□ -1.72
SOF1YLL011W YLR413WQ06689 675 aa4.31□□□□□ -1.72
SOF1YLL011W GSH2Q08220 491 aa4.31□□□□□ -1.72
SOF1YLL011W YIL002W-AQ3E7Z5 69 aa4.31□□□□□ -1.72
SOF1YLL011W YPR053CQ6Q5F3 151 aa4.31□□□□□ -1.72
SOF1YLL011W GCD2P12754 651 aaPredicted RBP4.3□□□□□ -1.72
SOF1YLL011W MCM4P30665 933 aaKnown RBP4.3□□□□□ -1.72
SOF1YLL011W LST4P34239 828 aa4.3□□□□□ -1.72
SOF1YLL011W TSC10P38342 320 aa4.3□□□□□ -1.72
SOF1YLL011W MSG5P38590 489 aa4.3□□□□□ -1.72
SOF1YLL011W TOM22P49334 152 aa4.3□□□□□ -1.72
SOF1YLL011W YGL108CP53139 140 aa4.3□□□□□ -1.72
SOF1YLL011W AAT1Q01802 451 aa4.3□□□□□ -1.72
SOF1YLL011W TMA10Q06177 86 aa4.3□□□□□ -1.72
SOF1YLL011W MCP2Q06567 569 aa4.3□□□□□ -1.72
SOF1YLL011W MDM20Q12387 796 aaKnown RBP4.3□□□□□ -1.72
SOF1YLL011W SFG1Q12507 346 aa4.3□□□□□ -1.72
SOF1YLL011W SAC3P46674 1301 aa4.3□□□□□ -1.72
SOF1YLL011W RIM1P32445 135 aaKnown RBP4.3□□□□□ -1.72
SOF1YLL011W TIF5P38431 405 aaKnown RBP4.3□□□□□ -1.72
SOF1YLL011W ANS1P38832 159 aa4.3□□□□□ -1.72
SOF1YLL011W MNN9P39107 395 aaKnown RBP4.3□□□□□ -1.72
SOF1YLL011W CIN4P39110 191 aa4.3□□□□□ -1.72
SOF1YLL011W SSO2P39926 295 aa4.3□□□□□ -1.72
SOF1YLL011W PMT6P42934 759 aa4.3□□□□□ -1.72
SOF1YLL011W LAM5P43560 674 aa4.3□□□□□ -1.72
SOF1YLL011W NMD5P46970 1048 aa4.3□□□□□ -1.72
SOF1YLL011W MPS2P53159 387 aa4.3□□□□□ -1.72
SOF1YLL011W CUR1Q06469 252 aa4.3□□□□□ -1.72
SOF1YLL011W PCL8Q08966 492 aa4.3□□□□□ -1.72
SOF1YLL011W NDJ1Q12366 352 aa4.3□□□□□ -1.72
SOF1YLL011W RPS13P05756 151 aaKnown RBP4.29□□□□□ -1.72
SOF1YLL011W COR1P07256 457 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 108 ms