RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C IRC13Q08630 104 aa9.82□□□□□ -0.84
SHB17YKR043C PNO1Q99216 274 aaKnown RBP9.82□□□□□ -0.84
SHB17YKR043C CUP1-1P0CX80 61 aa9.81□□□□□ -0.84
SHB17YKR043C CUP1-2P0CX81 61 aa9.81□□□□□ -0.84
SHB17YKR043C SGV1P23293 657 aaKnown RBP9.81□□□□□ -0.84
SHB17YKR043C IMG1P25626 169 aa9.81□□□□□ -0.84
SHB17YKR043C PET112P33893 541 aa9.81□□□□□ -0.84
SHB17YKR043C CTP1P38152 299 aa9.81□□□□□ -0.84
SHB17YKR043C YBR071WP38243 211 aa9.81□□□□□ -0.84
SHB17YKR043C BZZ1P38822 633 aa9.81□□□□□ -0.84
SHB17YKR043C ALR2P43553 858 aa9.81□□□□□ -0.84
SHB17YKR043C YGR250CP53316 781 aaKnown RBP9.81□□□□□ -0.84
SHB17YKR043C MPS1P54199 764 aa9.81□□□□□ -0.84
SHB17YKR043C YDL121CQ07541 149 aa9.81□□□□□ -0.84
SHB17YKR043C YOL073CQ08232 322 aa9.81□□□□□ -0.84
SHB17YKR043C GUP2Q08929 609 aa9.81□□□□□ -0.84
SHB17YKR043C TRP3P00937 484 aa9.8□□□□□ -0.84
SHB17YKR043C HXK2P04807 486 aaKnown RBP9.8□□□□□ -0.84
SHB17YKR043C RPC19P28000 142 aaKnown RBP9.8□□□□□ -0.84
SHB17YKR043C FUN30P31380 1131 aa9.8□□□□□ -0.84
SHB17YKR043C PDR3P33200 976 aa9.8□□□□□ -0.84
SHB17YKR043C LOS1P33418 1100 aaPredicted RBP9.8□□□□□ -0.84
SHB17YKR043C CBP4P37267 147 aa9.8□□□□□ -0.84
SHB17YKR043C UBS1P38290 277 aa9.8□□□□□ -0.84
SHB17YKR043C ARB1P40024 610 aaKnown RBP9.8□□□□□ -0.84
SHB17YKR043C YGR053CP53234 283 aa9.8□□□□□ -0.84
SHB17YKR043C LEU4P06208 619 aaKnown RBP9.79□□□□□ -0.84
SHB17YKR043C OCA4P25366 362 aa9.79□□□□□ -0.84
SHB17YKR043C MLS1P30952 554 aa9.79□□□□□ -0.84
SHB17YKR043C HSM3P38348 480 aa9.79□□□□□ -0.84
SHB17YKR043C YHR112CP38716 378 aa9.79□□□□□ -0.84
SHB17YKR043C MNL1P38888 796 aa9.79□□□□□ -0.84
SHB17YKR043C MRM2P53123 320 aa9.79□□□□□ -0.84
SHB17YKR043C PRO2P54885 456 aaKnown RBP9.79□□□□□ -0.84
SHB17YKR043C SHE9Q04172 456 aa9.79□□□□□ -0.84
SHB17YKR043C BSC2Q05611 235 aa9.79□□□□□ -0.84
SHB17YKR043C ESA1Q08649 445 aa9.79□□□□□ -0.84
SHB17YKR043C ATG34Q12292 412 aa9.79□□□□□ -0.84
SHB17YKR043C BRR2P32639 2163 aaKnown RBP9.79□□□□□ -0.84
SHB17YKR043C DST1P07273 309 aa9.78□□□□□ -0.84
SHB17YKR043C DBR1P24309 405 aaKnown RBP9.78□□□□□ -0.84
SHB17YKR043C SPS22P25380 463 aa9.78□□□□□ -0.84
SHB17YKR043C SRB5P32585 307 aa9.78□□□□□ -0.84
SHB17YKR043C YKR078WP36158 585 aaKnown RBP9.78□□□□□ -0.84
SHB17YKR043C APT2P36973 181 aa9.78□□□□□ -0.84
SHB17YKR043C UBP6P43593 499 aaKnown RBP9.78□□□□□ -0.84
SHB17YKR043C IBA57P47158 497 aa9.78□□□□□ -0.84
SHB17YKR043C YNL010WP53981 241 aaKnown RBP9.78□□□□□ -0.84
SHB17YKR043C SED5Q01590 340 aa9.78□□□□□ -0.84
SHB17YKR043C MET31Q03081 177 aa9.78□□□□□ -0.84
SHB17YKR043C MUS81Q04149 632 aaPredicted RBP9.78□□□□□ -0.84
SHB17YKR043C YPT6Q99260 215 aa9.78□□□□□ -0.84
SHB17YKR043C CDC5P32562 705 aa9.77□□□□□ -0.85
SHB17YKR043C YCR087C-AP37263 153 aa9.77□□□□□ -0.85
SHB17YKR043C YRO2P38079 344 aa9.77□□□□□ -0.85
SHB17YKR043C YEN1P40028 759 aa9.77□□□□□ -0.85
SHB17YKR043C YIL086CP40503 102 aa9.77□□□□□ -0.85
SHB17YKR043C MAD2P40958 196 aa9.77□□□□□ -0.85
SHB17YKR043C MEP2P41948 499 aa9.77□□□□□ -0.85
SHB17YKR043C GUS1P46655 708 aaKnown RBP RIP-Chip data9.77□□□□□ -0.85not detected
SHB17YKR043C NAS6P50086 228 aa9.77□□□□□ -0.85
SHB17YKR043C CUS2P53830 285 aaPredicted RBP9.77□□□□□ -0.85
SHB17YKR043C YNL140CP53910 189 aa9.77□□□□□ -0.85
SHB17YKR043C GLO2Q05584 274 aa9.77□□□□□ -0.85
SHB17YKR043C GIC2Q06648 383 aa9.77□□□□□ -0.85
SHB17YKR043C RRP40Q08285 240 aaKnown RBP9.77□□□□□ -0.85
SHB17YKR043C NMD4Q12129 218 aa9.77□□□□□ -0.85
SHB17YKR043C HFA1P32874 2273 aa9.76□□□□□ -0.85
SHB17YKR043C BCY1P07278 416 aaKnown RBP9.76□□□□□ -0.85
SHB17YKR043C TY2A-LR1P0C2J4 438 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-FP0CX61 438 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-GR2P0CX62 438 aa9.76□□□□□ -0.85
SHB17YKR043C NPP1P25353 742 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-CP25383 438 aa9.76□□□□□ -0.85
SHB17YKR043C ERG1P32476 496 aaKnown RBP9.76□□□□□ -0.85
SHB17YKR043C PET127P32606 800 aa9.76□□□□□ -0.85
SHB17YKR043C MRE11P32829 692 aa9.76□□□□□ -0.85
SHB17YKR043C CAF4P36130 643 aa9.76□□□□□ -0.85
SHB17YKR043C MRPL15P36523 253 aa9.76□□□□□ -0.85
SHB17YKR043C ASC1P38011 319 aaKnown RBP9.76□□□□□ -0.85
SHB17YKR043C PTR3P43606 678 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-DR2Q03483 438 aa9.76□□□□□ -0.85
SHB17YKR043C YDR124WQ04608 324 aa9.76□□□□□ -0.85
SHB17YKR043C YEH2Q07950 538 aa9.76□□□□□ -0.85
SHB17YKR043C RUP1Q12242 671 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-BQ12260 438 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-OR2Q12293 438 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-DR1Q12392 438 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-OR1Q12439 438 aa9.76□□□□□ -0.85
SHB17YKR043C TY2A-DR3Q99303 438 aa9.76□□□□□ -0.85
SHB17YKR043C CAR1P00812 333 aaKnown RBP9.75□□□□□ -0.85
SHB17YKR043C PRT1P06103 763 aaKnown RBP9.75□□□□□ -0.85
SHB17YKR043C PTC1P35182 281 aa9.75□□□□□ -0.85
SHB17YKR043C HES1P35843 434 aa9.75□□□□□ -0.85
SHB17YKR043C SDT1P53078 280 aa9.75□□□□□ -0.85
SHB17YKR043C REX2P54964 269 aaKnown RBP9.75□□□□□ -0.85
SHB17YKR043C XYL2Q07993 356 aa9.75□□□□□ -0.85
SHB17YKR043C GYP1Q08484 637 aa9.75□□□□□ -0.85
SHB17YKR043C SLF1Q12034 447 aaKnown RBP9.75□□□□□ -0.85
SHB17YKR043C YLL054CQ12244 843 aa9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms