RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YNL134CP53912 376 aaKnown RBP2.11□□□□□ -2.07
UFD4YKL010C DMA2P53924 522 aa2.11□□□□□ -2.07
UFD4YKL010C YPL034WQ03083 165 aa2.11□□□□□ -2.07
UFD4YKL010C GOT1Q03554 138 aa2.11□□□□□ -2.07
UFD4YKL010C EMI1Q04406 187 aa2.11□□□□□ -2.07
UFD4YKL010C RTN1Q04947 295 aaKnown RBP2.11□□□□□ -2.07
UFD4YKL010C ATG26Q06321 1198 aa2.11□□□□□ -2.07
UFD4YKL010C PGC1Q08959 321 aa2.11□□□□□ -2.07
UFD4YKL010C HEM2P05373 342 aa2.1□□□□□ -2.07
UFD4YKL010C NAR1P23503 491 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C CPR3P25719 182 aa2.1□□□□□ -2.07
UFD4YKL010C CTS1P29029 562 aa2.1□□□□□ -2.07
UFD4YKL010C PTM1P32857 523 aa2.1□□□□□ -2.07
UFD4YKL010C EMC3P36039 253 aa2.1□□□□□ -2.07
UFD4YKL010C SRP68P38687 599 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C AVT6P40074 448 aa2.1□□□□□ -2.07
UFD4YKL010C PDS1P40316 373 aaPredicted RBP2.1□□□□□ -2.07
UFD4YKL010C TIS11P47977 285 aa2.1□□□□□ -2.07
UFD4YKL010C EFM6P53970 246 aa2.1□□□□□ -2.07
UFD4YKL010C SMA1Q02651 245 aa2.1□□□□□ -2.07
UFD4YKL010C UGO1Q03327 502 aa2.1□□□□□ -2.07
UFD4YKL010C CEF1Q03654 590 aaPredicted RBP2.1□□□□□ -2.07
UFD4YKL010C TRM12Q04235 462 aa2.1□□□□□ -2.07
UFD4YKL010C YOL159CQ08300 171 aa2.1□□□□□ -2.07
UFD4YKL010C GPR1Q12361 961 aa2.1□□□□□ -2.07
UFD4YKL010C MHT1Q12525 324 aa2.1□□□□□ -2.07
UFD4YKL010C YGR161W-CQ3E744 92 aa2.1□□□□□ -2.07
UFD4YKL010C TAT1P38085 619 aa2.1□□□□□ -2.07
UFD4YKL010C NPT1P39683 429 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C YEL020CP39994 560 aa2.1□□□□□ -2.07
UFD4YKL010C HEM14P40012 539 aa2.1□□□□□ -2.07
UFD4YKL010C SPO73P40031 143 aa2.1□□□□□ -2.07
UFD4YKL010C JHD1P40034 492 aa2.1□□□□□ -2.07
UFD4YKL010C PRM2P40534 656 aa2.1□□□□□ -2.07
UFD4YKL010C YJL218WP40892 196 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C IRC7P43623 340 aa2.1□□□□□ -2.07
UFD4YKL010C YJL043WP47053 257 aa2.1□□□□□ -2.07
UFD4YKL010C TWF1P53250 332 aa2.1□□□□□ -2.07
UFD4YKL010C PRM1P53835 661 aa2.1□□□□□ -2.07
UFD4YKL010C RRN5Q02983 363 aa2.1□□□□□ -2.07
UFD4YKL010C MUS81Q04149 632 aaPredicted RBP2.1□□□□□ -2.07
UFD4YKL010C RAD33Q04231 177 aa2.1□□□□□ -2.07
UFD4YKL010C GPI11Q06636 219 aa2.1□□□□□ -2.07
UFD4YKL010C NTG2Q08214 380 aa2.1□□□□□ -2.07
UFD4YKL010C PFK27Q12471 397 aaPredicted RBP2.1□□□□□ -2.07
UFD4YKL010C SUI3P09064 285 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C LAT1P12695 482 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C NDI1P32340 513 aa2.1□□□□□ -2.07
UFD4YKL010C SKT5P34226 696 aa2.1□□□□□ -2.07
UFD4YKL010C YHR020WP38708 688 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C DDI1P40087 428 aa2.1□□□□□ -2.07
UFD4YKL010C MSS2P40990 351 aa2.1□□□□□ -2.07
UFD4YKL010C ROK1P45818 564 aaPredicted RBP2.1□□□□□ -2.07
UFD4YKL010C RBL2P48606 106 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C RNR4P49723 345 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C MPS2P53159 387 aa2.1□□□□□ -2.07
UFD4YKL010C NHP10Q03435 203 aa2.1□□□□□ -2.07
UFD4YKL010C BCH1Q05029 724 aa2.1□□□□□ -2.07
UFD4YKL010C ARO10Q06408 635 aa2.1□□□□□ -2.07
UFD4YKL010C VAM6Q07468 1049 aa2.1□□□□□ -2.07
UFD4YKL010C LEA1Q08963 238 aaPredicted RBP2.1□□□□□ -2.07
UFD4YKL010C PSY3Q12318 242 aa2.1□□□□□ -2.07
UFD4YKL010C SCM3Q12334 223 aa2.1□□□□□ -2.07
UFD4YKL010C PST2Q12335 198 aaKnown RBP2.1□□□□□ -2.07
UFD4YKL010C APA1P16550 321 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C SFA1P32771 386 aa2.09□□□□□ -2.07
UFD4YKL010C CBF5P33322 483 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
UFD4YKL010C LOT5P34234 306 aa2.09□□□□□ -2.07
UFD4YKL010C RBG1P39729 369 aa2.09□□□□□ -2.07
UFD4YKL010C PRY1P47032 299 aa2.09□□□□□ -2.07
UFD4YKL010C GPI1P53306 609 aa2.09□□□□□ -2.07
UFD4YKL010C CCE1Q03702 353 aa2.09□□□□□ -2.07
UFD4YKL010C SEC13Q04491 297 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C PHO92Q06390 306 aa2.09□□□□□ -2.07
UFD4YKL010C NDL1Q06568 189 aa2.09□□□□□ -2.07
UFD4YKL010C RSA1Q08932 381 aa2.09□□□□□ -2.07
UFD4YKL010C YVC1Q12324 675 aa2.09□□□□□ -2.07
UFD4YKL010C PNS1Q12412 539 aa2.09□□□□□ -2.07
UFD4YKL010C YCL012CQ8J0M4 134 aa2.09□□□□□ -2.07
UFD4YKL010C REP1P03871 373 aa2.09□□□□□ -2.07
UFD4YKL010C RAD7P06779 565 aa2.09□□□□□ -2.07
UFD4YKL010C PUT2P07275 575 aa2.09□□□□□ -2.07
UFD4YKL010C YAR066WP0CX18 203 aa2.09□□□□□ -2.07
UFD4YKL010C YHR214WP0CX19 203 aa2.09□□□□□ -2.07
UFD4YKL010C SBP1P10080 294 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C AMD1P15274 810 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C MEF1P25039 761 aa2.09□□□□□ -2.07
UFD4YKL010C UGP1P32861 499 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C ATO2P32907 282 aa2.09□□□□□ -2.07
UFD4YKL010C RPT5P33297 434 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C MAE1P36013 669 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C DOA1P36037 715 aa2.09□□□□□ -2.07
UFD4YKL010C MRPL17P36528 281 aa2.09□□□□□ -2.07
UFD4YKL010C MBA1P38300 278 aa2.09□□□□□ -2.07
UFD4YKL010C CCT6P39079 546 aa2.09□□□□□ -2.07
UFD4YKL010C PCL6P40038 420 aa2.09□□□□□ -2.07
UFD4YKL010C YJL070CP40361 888 aa2.09□□□□□ -2.07
UFD4YKL010C SPO74P45819 413 aa2.09□□□□□ -2.07
UFD4YKL010C HOC1P47124 396 aa2.09□□□□□ -2.07
UFD4YKL010C TPN1P53099 579 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms