RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MSS18P08593 268 aa13.44□□□□□ -0.26
RPN10YHR200W RPS4AP0CX35 261 aaKnown RBP13.44□□□□□ -0.26
RPN10YHR200W RPS4BP0CX36 261 aaKnown RBP13.44□□□□□ -0.26
RPN10YHR200W RVS161P25343 265 aaKnown RBP13.44□□□□□ -0.26
RPN10YHR200W FUN30P31380 1131 aa13.44□□□□□ -0.26
RPN10YHR200W MGM101P32787 269 aaKnown RBP13.44□□□□□ -0.26
RPN10YHR200W GLG1P36143 616 aa13.44□□□□□ -0.26
RPN10YHR200W MRPL37P36532 105 aa13.44□□□□□ -0.26
RPN10YHR200W TRM7P38238 310 aaKnown RBP13.44□□□□□ -0.26
RPN10YHR200W GET1P53192 235 aa13.44□□□□□ -0.26
RPN10YHR200W MPS1P54199 764 aa13.44□□□□□ -0.26
RPN10YHR200W MET31Q03081 177 aa13.44□□□□□ -0.26
RPN10YHR200W NMD4Q12129 218 aa13.44□□□□□ -0.26
RPN10YHR200W JLP1Q12358 412 aa13.44□□□□□ -0.26
RPN10YHR200W MHT1Q12525 324 aa13.44□□□□□ -0.26
RPN10YHR200W TOR2P32600 2474 aaKnown RBP13.44□□□□□ -0.26
RPN10YHR200W DST1P07273 309 aa13.43□□□□□ -0.26
RPN10YHR200W CLB3P24870 427 aa13.43□□□□□ -0.26
RPN10YHR200W SPT16P32558 1035 aaKnown RBP13.43□□□□□ -0.26
RPN10YHR200W SRX1P36077 127 aa13.43□□□□□ -0.26
RPN10YHR200W MRPL17P36528 281 aa13.43□□□□□ -0.26
RPN10YHR200W PCF11P39081 626 aaPredicted RBP13.43□□□□□ -0.26
RPN10YHR200W AIM22P47051 409 aa13.43□□□□□ -0.26
RPN10YHR200W CWC24P53769 259 aa13.43□□□□□ -0.26
RPN10YHR200W SDH1Q00711 640 aa13.43□□□□□ -0.26
RPN10YHR200W SSQ1Q05931 657 aaPredicted RBP13.43□□□□□ -0.26
RPN10YHR200W GET4Q12125 312 aa13.43□□□□□ -0.26
RPN10YHR200W NTO1Q12311 748 aa13.43□□□□□ -0.26
RPN10YHR200W MEF1P25039 761 aa13.42□□□□□ -0.26
RPN10YHR200W NTR2P36118 322 aaPredicted RBP13.42□□□□□ -0.26
RPN10YHR200W GGC1P38988 300 aa13.42□□□□□ -0.26
RPN10YHR200W NUP85P46673 744 aa13.42□□□□□ -0.26
RPN10YHR200W ECM9Q02202 377 aa13.42□□□□□ -0.26
RPN10YHR200W ATP25Q03153 612 aa13.42□□□□□ -0.26
RPN10YHR200W RTT10Q08924 1013 aa13.42□□□□□ -0.26
RPN10YHR200W RPN6Q12377 434 aa13.42□□□□□ -0.26
RPN10YHR200W FAB1P34756 2278 aa13.42□□□□□ -0.26
RPN10YHR200W ATO2P32907 282 aa13.41□□□□□ -0.26
RPN10YHR200W ROT2P38138 954 aa13.41□□□□□ -0.26
RPN10YHR200W TIF34P40217 347 aaKnown RBP13.41□□□□□ -0.26
RPN10YHR200W GAB1P41733 394 aa13.41□□□□□ -0.26
RPN10YHR200W FMP32P43557 207 aa13.41□□□□□ -0.26
RPN10YHR200W GPI1P53306 609 aa13.41□□□□□ -0.26
RPN10YHR200W AAT1Q01802 451 aa13.41□□□□□ -0.26
RPN10YHR200W ROT1Q03691 256 aa13.41□□□□□ -0.26
RPN10YHR200W MUS81Q04149 632 aaPredicted RBP13.41□□□□□ -0.26
RPN10YHR200W COS7Q07788 383 aa13.41□□□□□ -0.26
RPN10YHR200W YLL007CQ07799 665 aa13.41□□□□□ -0.26
RPN10YHR200W ARG3P05150 338 aa13.4□□□□□ -0.26
RPN10YHR200W SIS1P25294 352 aaKnown RBP13.4□□□□□ -0.26
RPN10YHR200W SSU1P41930 458 aa13.4□□□□□ -0.26
RPN10YHR200W PTR3P43606 678 aa13.4□□□□□ -0.26
RPN10YHR200W FMP33P46998 180 aa13.4□□□□□ -0.26
RPN10YHR200W KXD1P53158 218 aa13.4□□□□□ -0.26
RPN10YHR200W YMR010WQ03687 405 aa13.4□□□□□ -0.26
RPN10YHR200W RAD33Q04231 177 aa13.4□□□□□ -0.26
RPN10YHR200W YHC1Q05900 231 aaKnown RBP13.4□□□□□ -0.26
RPN10YHR200W PRI2P20457 528 aa13.39□□□□□ -0.27
RPN10YHR200W NGG1P32494 702 aa13.39□□□□□ -0.27
RPN10YHR200W PET309P32522 965 aaPredicted RBP13.39□□□□□ -0.27
RPN10YHR200W UBP14P38237 781 aaKnown RBP13.39□□□□□ -0.27
RPN10YHR200W PFS1P38872 237 aa13.39□□□□□ -0.27
RPN10YHR200W BEM4P39011 633 aa13.39□□□□□ -0.27
RPN10YHR200W DSS1P39112 969 aa13.39□□□□□ -0.27
RPN10YHR200W YAL037WP39728 267 aa13.39□□□□□ -0.27
RPN10YHR200W RGI1P40043 161 aaPredicted RBP13.39□□□□□ -0.27
RPN10YHR200W DSL1P53847 754 aa13.39□□□□□ -0.27
RPN10YHR200W ULA1Q12059 462 aa13.39□□□□□ -0.27
RPN10YHR200W TY2A-LR1P0C2J4 438 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-FP0CX61 438 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-GR2P0CX62 438 aa13.38□□□□□ -0.27
RPN10YHR200W KAR1P11927 433 aa13.38□□□□□ -0.27
RPN10YHR200W RED1P14291 827 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-CP25383 438 aa13.38□□□□□ -0.27
RPN10YHR200W PET127P32606 800 aa13.38□□□□□ -0.27
RPN10YHR200W COS111P38308 924 aa13.38□□□□□ -0.27
RPN10YHR200W YIL108WP40483 696 aaKnown RBP13.38□□□□□ -0.27
RPN10YHR200W SDT1P53078 280 aa13.38□□□□□ -0.27
RPN10YHR200W YGR016WP53209 190 aa13.38□□□□□ -0.27
RPN10YHR200W YGR250CP53316 781 aaKnown RBP13.38□□□□□ -0.27
RPN10YHR200W YNL033WP53964 284 aa13.38□□□□□ -0.27
RPN10YHR200W YNL019CP53975 284 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-DR2Q03483 438 aa13.38□□□□□ -0.27
RPN10YHR200W YML053CQ04978 212 aa13.38□□□□□ -0.27
RPN10YHR200W ASA1Q06822 443 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-BQ12260 438 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-OR2Q12293 438 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-DR1Q12392 438 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-OR1Q12439 438 aa13.38□□□□□ -0.27
RPN10YHR200W TY2A-DR3Q99303 438 aa13.38□□□□□ -0.27
RPN10YHR200W Q0010Q9ZZX9 128 aa13.38□□□□□ -0.27
RPN10YHR200W CBP2P03874 630 aaPredicted RBP13.37□□□□□ -0.27
RPN10YHR200W BCY1P07278 416 aaKnown RBP13.37□□□□□ -0.27
RPN10YHR200W RPS21AP0C0V8 87 aaKnown RBP13.37□□□□□ -0.27
RPN10YHR200W GCD2P12754 651 aaPredicted RBP13.37□□□□□ -0.27
RPN10YHR200W SPO23P33757 523 aa13.37□□□□□ -0.27
RPN10YHR200W MRP8P35719 219 aa13.37□□□□□ -0.27
RPN10YHR200W PIM1P36775 1133 aa13.37□□□□□ -0.27
RPN10YHR200W APQ12P40532 138 aa13.37□□□□□ -0.27
RPN10YHR200W KEL2P50090 882 aa13.37□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms