RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C CHA4P43634 648 aa6.4□□□□□ -1.38
SHO1YER118C DBP6P53734 629 aaKnown RBP6.4□□□□□ -1.38
SHO1YER118C KTR6P54070 446 aa6.4□□□□□ -1.38
SHO1YER118C PET117Q02771 107 aa6.4□□□□□ -1.38
SHO1YER118C PNG1Q02890 363 aa6.4□□□□□ -1.38
SHO1YER118C UFO1Q04511 668 aa6.4□□□□□ -1.38
SHO1YER118C VAC14Q06708 880 aa6.4□□□□□ -1.38
SHO1YER118C ETT1Q08421 412 aaKnown RBP6.4□□□□□ -1.38
SHO1YER118C KSS1P14681 368 aa6.39□□□□□ -1.39
SHO1YER118C MEK1P24719 497 aaPredicted RBP6.39□□□□□ -1.39
SHO1YER118C MEI5P32489 222 aa6.39□□□□□ -1.39
SHO1YER118C SRB4P32569 687 aa6.39□□□□□ -1.39
SHO1YER118C SIP1P32578 815 aa6.39□□□□□ -1.39
SHO1YER118C PTK1P36002 662 aaPredicted RBP6.39□□□□□ -1.39
SHO1YER118C YMR147WP40218 223 aaKnown RBP6.39□□□□□ -1.39
SHO1YER118C AIM22P47051 409 aa6.39□□□□□ -1.39
SHO1YER118C MPS3P47069 682 aa6.39□□□□□ -1.39
SHO1YER118C CTH1P47976 325 aa6.39□□□□□ -1.39
SHO1YER118C RIB4P50861 169 aaPredicted RBP6.39□□□□□ -1.39
SHO1YER118C EFM5P53200 248 aaKnown RBP6.39□□□□□ -1.39
SHO1YER118C GTF1P53260 183 aaPredicted RBP6.39□□□□□ -1.39
SHO1YER118C ADE16P54113 591 aaKnown RBP6.39□□□□□ -1.39
SHO1YER118C CAB5Q03941 241 aa6.39□□□□□ -1.39
SHO1YER118C RTN1Q04947 295 aaKnown RBP6.39□□□□□ -1.39
SHO1YER118C COQ9Q05779 260 aa6.39□□□□□ -1.39
SHO1YER118C DIB1Q06819 143 aaPredicted RBP6.39□□□□□ -1.39
SHO1YER118C YPL216WQ08964 1102 aa6.39□□□□□ -1.39
SHO1YER118C RRD2Q12461 358 aa6.39□□□□□ -1.39
SHO1YER118C PCT1P13259 424 aa6.38□□□□□ -1.39
SHO1YER118C CDC20P26309 610 aa6.38□□□□□ -1.39
SHO1YER118C PRS1P32895 427 aaKnown RBP6.38□□□□□ -1.39
SHO1YER118C SOF1P33750 489 aaKnown RBP6.38□□□□□ -1.39
SHO1YER118C ECM4P36156 370 aa6.38□□□□□ -1.39
SHO1YER118C ECM10P39987 644 aa6.38□□□□□ -1.39
SHO1YER118C YER085CP40058 173 aa6.38□□□□□ -1.39
SHO1YER118C YIR014WP40570 242 aa6.38□□□□□ -1.39
SHO1YER118C PIB2P53191 635 aa6.38□□□□□ -1.39
SHO1YER118C TIM21P53220 239 aa6.38□□□□□ -1.39
SHO1YER118C VOA1P53262 265 aa6.38□□□□□ -1.39
SHO1YER118C YGR126WP53274 230 aa6.38□□□□□ -1.39
SHO1YER118C REX2P54964 269 aaKnown RBP6.38□□□□□ -1.39
SHO1YER118C SSY1Q03770 852 aa6.38□□□□□ -1.39
SHO1YER118C YDR109CQ04585 715 aa6.38□□□□□ -1.39
SHO1YER118C RRN11Q04712 507 aa6.38□□□□□ -1.39
SHO1YER118C IPK1Q06667 281 aa6.38□□□□□ -1.39
SHO1YER118C YOR012WQ12351 137 aa6.38□□□□□ -1.39
SHO1YER118C NPC2Q12408 173 aa6.38□□□□□ -1.39
SHO1YER118C GPH1P06738 902 aaKnown RBP6.37□□□□□ -1.39
SHO1YER118C ALG1P16661 449 aa6.37□□□□□ -1.39
SHO1YER118C GID7P25569 745 aa6.37□□□□□ -1.39
SHO1YER118C ADY2P25613 283 aa6.37□□□□□ -1.39
SHO1YER118C RPF2P36160 344 aaKnown RBP6.37□□□□□ -1.39
SHO1YER118C ICS2P38284 255 aa6.37□□□□□ -1.39
SHO1YER118C ERG7P38604 731 aa6.37□□□□□ -1.39
SHO1YER118C YHR045WP38775 560 aa6.37□□□□□ -1.39
SHO1YER118C RIX1P38883 763 aaPredicted RBP6.37□□□□□ -1.39
SHO1YER118C YHR210CP38893 341 aa6.37□□□□□ -1.39
SHO1YER118C RCY1P39531 840 aa6.37□□□□□ -1.39
SHO1YER118C SHQ1P40486 507 aaPredicted RBP6.37□□□□□ -1.39
SHO1YER118C PTR3P43606 678 aa6.37□□□□□ -1.39
SHO1YER118C MRK1P50873 501 aa6.37□□□□□ -1.39
SHO1YER118C YGL108CP53139 140 aa6.37□□□□□ -1.39
SHO1YER118C SRL4Q03085 281 aa6.37□□□□□ -1.39
SHO1YER118C APC4Q04601 652 aa6.37□□□□□ -1.39
SHO1YER118C YPR078CQ06813 372 aa6.37□□□□□ -1.39
SHO1YER118C MRH1Q12117 320 aaPredicted RBP6.37□□□□□ -1.39
SHO1YER118C DCP1Q12517 231 aaPredicted RBP6.37□□□□□ -1.39
SHO1YER118C RTC1Q08281 1341 aa6.36□□□□□ -1.39
SHO1YER118C AI3P03877 415 aa6.36□□□□□ -1.39
SHO1YER118C AAC1P04710 309 aa6.36□□□□□ -1.39
SHO1YER118C CDC36P06100 191 aaPredicted RBP6.36□□□□□ -1.39
SHO1YER118C ERG11P10614 530 aa6.36□□□□□ -1.39
SHO1YER118C FUS3P16892 353 aaKnown RBP6.36□□□□□ -1.39
SHO1YER118C SAR1P20606 190 aaKnown RBP6.36□□□□□ -1.39
SHO1YER118C RPI1P23250 407 aaKnown RBP6.36□□□□□ -1.39
SHO1YER118C KRE2P27809 442 aa6.36□□□□□ -1.39
SHO1YER118C ARO4P32449 370 aaKnown RBP6.36□□□□□ -1.39
SHO1YER118C LHS1P36016 881 aa6.36□□□□□ -1.39
SHO1YER118C PCA1P38360 1216 aa6.36□□□□□ -1.39
SHO1YER118C YER130CP39959 443 aa6.36□□□□□ -1.39
SHO1YER118C PHM8P40025 321 aa6.36□□□□□ -1.39
SHO1YER118C ROG1P53118 685 aa6.36□□□□□ -1.39
SHO1YER118C PLB2Q03674 706 aa6.36□□□□□ -1.39
SHO1YER118C GTO3Q04806 366 aa6.36□□□□□ -1.39
SHO1YER118C CYK3Q07533 885 aa6.36□□□□□ -1.39
SHO1YER118C YDL242WQ07746 117 aa6.36□□□□□ -1.39
SHO1YER118C FMP16Q12497 93 aa6.36□□□□□ -1.39
SHO1YER118C YMR085WP0CF18 432 aa6.35□□□□□ -1.39
SHO1YER118C CDC23P16522 626 aa6.35□□□□□ -1.39
SHO1YER118C AMD2P22580 549 aa6.35□□□□□ -1.39
SHO1YER118C LAC1P28496 418 aa6.35□□□□□ -1.39
SHO1YER118C BEM1P29366 551 aa6.35□□□□□ -1.39
SHO1YER118C PSO2P30620 661 aa6.35□□□□□ -1.39
SHO1YER118C CUE2P36075 443 aaKnown RBP6.35□□□□□ -1.39
SHO1YER118C CTP1P38152 299 aa6.35□□□□□ -1.39
SHO1YER118C OLA1P38219 394 aaKnown RBP6.35□□□□□ -1.39
SHO1YER118C SAP1P39955 897 aaKnown RBP6.35□□□□□ -1.39
SHO1YER118C ATM1P40416 690 aa6.35□□□□□ -1.39
SHO1YER118C YIR042CP40586 236 aa6.35□□□□□ -1.39
SHO1YER118C OPT1P40897 799 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms