RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W MIS1P09440 975 aaKnown RBP4.51□□□□□ -1.69
SPT3YDR392W YCK1P23291 538 aa4.51□□□□□ -1.69
SPT3YDR392W UGP1P32861 499 aaKnown RBP4.51□□□□□ -1.69
SPT3YDR392W RMA1P36001 430 aaKnown RBP4.51□□□□□ -1.69
SPT3YDR392W GND1P38720 489 aaKnown RBP4.51□□□□□ -1.69
SPT3YDR392W APE4P38821 490 aa4.51□□□□□ -1.69
SPT3YDR392W STN1P38960 494 aa4.51□□□□□ -1.69
SPT3YDR392W PAC2P39937 518 aa4.51□□□□□ -1.69
SPT3YDR392W ALF1P53904 254 aa4.51□□□□□ -1.69
SPT3YDR392W IWR1Q07532 353 aaPredicted RBP4.51□□□□□ -1.69
SPT3YDR392W YLR001CQ07895 862 aa4.51□□□□□ -1.69
SPT3YDR392W TMC1Q08422 150 aaPredicted RBP4.51□□□□□ -1.69
SPT3YDR392W PAB1P04147 577 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SPT3YDR392W ELO2P25358 347 aa4.5□□□□□ -1.69
SPT3YDR392W FAA1P30624 700 aaKnown RBP4.5□□□□□ -1.69
SPT3YDR392W SPC29P33419 253 aa4.5□□□□□ -1.69
SPT3YDR392W TRZ1P36159 838 aaPredicted RBP4.5□□□□□ -1.69
SPT3YDR392W YMC2P38087 329 aa4.5□□□□□ -1.69
SPT3YDR392W MIP6P38760 659 aaKnown RBP4.5□□□□□ -1.69
SPT3YDR392W MND1P53102 219 aa4.5□□□□□ -1.69
SPT3YDR392W RPA49Q01080 415 aaPredicted RBP4.5□□□□□ -1.69
SPT3YDR392W YPL068CQ02749 293 aa4.5□□□□□ -1.69
SPT3YDR392W INA17Q02888 182 aa4.5□□□□□ -1.69
SPT3YDR392W FUR1P18562 216 aaKnown RBP4.49□□□□□ -1.69
SPT3YDR392W UBA1P22515 1024 aaKnown RBP4.49□□□□□ -1.69
SPT3YDR392W TUL1P36096 758 aa4.49□□□□□ -1.69
SPT3YDR392W TRM7P38238 310 aaKnown RBP4.49□□□□□ -1.69
SPT3YDR392W LCB2P40970 561 aa4.49□□□□□ -1.69
SPT3YDR392W UBC9P50623 157 aaPredicted RBP4.49□□□□□ -1.69
SPT3YDR392W MTL1P53214 551 aa4.49□□□□□ -1.69
SPT3YDR392W GFD1Q04839 188 aaKnown RBP4.49□□□□□ -1.69
SPT3YDR392W KAP95Q06142 861 aaKnown RBP4.49□□□□□ -1.69
SPT3YDR392W OPY2Q06810 360 aa4.49□□□□□ -1.69
SPT3YDR392W PML1Q07930 204 aaPredicted RBP4.49□□□□□ -1.69
SPT3YDR392W HIS1P00498 297 aaKnown RBP4.48□□□□□ -1.69
SPT3YDR392W EPT1P22140 391 aa4.48□□□□□ -1.69
SPT3YDR392W VPS34P22543 875 aa4.48□□□□□ -1.69
SPT3YDR392W APT2P36973 181 aa4.48□□□□□ -1.69
SPT3YDR392W OPY1P38271 328 aa4.48□□□□□ -1.69
SPT3YDR392W YHR112CP38716 378 aa4.48□□□□□ -1.69
SPT3YDR392W CYC2P38909 366 aa4.48□□□□□ -1.69
SPT3YDR392W RPT2P40327 437 aaKnown RBP4.48□□□□□ -1.69
SPT3YDR392W ALY2P47029 1046 aa4.48□□□□□ -1.69
SPT3YDR392W TIM54P47045 478 aa4.48□□□□□ -1.69
SPT3YDR392W IBA57P47158 497 aa4.48□□□□□ -1.69
SPT3YDR392W TOM22P49334 152 aa4.48□□□□□ -1.69
SPT3YDR392W FHN1P53279 174 aa4.48□□□□□ -1.69
SPT3YDR392W MTQ1P53944 314 aa4.48□□□□□ -1.69
SPT3YDR392W ARG5,6Q01217 863 aa4.48□□□□□ -1.69
SPT3YDR392W SED5Q01590 340 aa4.48□□□□□ -1.69
SPT3YDR392W ARA2Q04212 335 aa4.48□□□□□ -1.69
SPT3YDR392W CYK3Q07533 885 aa4.48□□□□□ -1.69
SPT3YDR392W CUE5Q08412 411 aaKnown RBP4.48□□□□□ -1.69
SPT3YDR392W YOL107WQ12239 342 aa4.48□□□□□ -1.69
SPT3YDR392W CDC36P06100 191 aaPredicted RBP4.47□□□□□ -1.69
SPT3YDR392W SCH9P11792 824 aaKnown RBP4.47□□□□□ -1.69
SPT3YDR392W MSH1P25846 959 aa4.47□□□□□ -1.69
SPT3YDR392W GMH1P36125 273 aa4.47□□□□□ -1.69
SPT3YDR392W EDC3P39998 551 aaKnown RBP4.47□□□□□ -1.69
SPT3YDR392W YIL012WP40551 113 aa4.47□□□□□ -1.69
SPT3YDR392W MRK1P50873 501 aa4.47□□□□□ -1.69
SPT3YDR392W ARX1Q03862 593 aaKnown RBP4.47□□□□□ -1.69
SPT3YDR392W ARO80Q04052 950 aa4.47□□□□□ -1.69
SPT3YDR392W YDR109CQ04585 715 aa4.47□□□□□ -1.69
SPT3YDR392W YER145C-AA0A023PYF4 145 aa4.46□□□□□ -1.7
SPT3YDR392W COX5AP00424 153 aa4.46□□□□□ -1.7
SPT3YDR392W PRB1P09232 635 aa4.46□□□□□ -1.7
SPT3YDR392W PHO84P25297 587 aaKnown RBP4.46□□□□□ -1.7
SPT3YDR392W YME1P32795 747 aa4.46□□□□□ -1.7
SPT3YDR392W PHO11P35842 467 aa4.46□□□□□ -1.7
SPT3YDR392W ALY1P36117 915 aa4.46□□□□□ -1.7
SPT3YDR392W BET3P36149 193 aa4.46□□□□□ -1.7
SPT3YDR392W YBR139WP38109 508 aa4.46□□□□□ -1.7
SPT3YDR392W PHO12P38693 467 aa4.46□□□□□ -1.7
SPT3YDR392W LYS9P38999 446 aa4.46□□□□□ -1.7
SPT3YDR392W SNG1P46950 547 aa4.46□□□□□ -1.7
SPT3YDR392W SIP4P46954 829 aa4.46□□□□□ -1.7
SPT3YDR392W RAD17P48581 401 aa4.46□□□□□ -1.7
SPT3YDR392W COX18P53239 316 aa4.46□□□□□ -1.7
SPT3YDR392W MCM21Q06675 368 aa4.46□□□□□ -1.7
SPT3YDR392W ZRT2Q12436 422 aa4.46□□□□□ -1.7
SPT3YDR392W JIP3O13555 125 aa4.45□□□□□ -1.7
SPT3YDR392W MET16P18408 261 aaPredicted RBP4.45□□□□□ -1.7
SPT3YDR392W FLO5P38894 1075 aa4.45□□□□□ -1.7
SPT3YDR392W RPH1P39956 796 aa4.45□□□□□ -1.7
SPT3YDR392W TPA1P40032 644 aaKnown RBP4.45□□□□□ -1.7
SPT3YDR392W GDS1P41913 522 aa4.45□□□□□ -1.7
SPT3YDR392W YJL049WP47048 450 aa4.45□□□□□ -1.7
SPT3YDR392W FPR4Q06205 392 aaPredicted RBP4.45□□□□□ -1.7
SPT3YDR392W GAL7P08431 366 aa4.44□□□□□ -1.7
SPT3YDR392W CDC42P19073 191 aa4.44□□□□□ -1.7
SPT3YDR392W PRS3P38689 320 aaKnown RBP4.44□□□□□ -1.7
SPT3YDR392W HRB1P38922 454 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SPT3YDR392W SEH1P53011 349 aaKnown RBP4.44□□□□□ -1.7
SPT3YDR392W KTR6P54070 446 aa4.44□□□□□ -1.7
SPT3YDR392W TIM8P57744 87 aa4.44□□□□□ -1.7
SPT3YDR392W RIM13Q03792 727 aa4.44□□□□□ -1.7
SPT3YDR392W MLH3Q12083 715 aa4.44□□□□□ -1.7
SPT3YDR392W YOR032W-AQ8TGS1 66 aa4.44□□□□□ -1.7
SPT3YDR392W CPA1P07258 411 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms