RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB7, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB7YDR308C YDL007C-AQ2V2Q0 85 aa3.56□□□□□ -1.84
SRB7YDR308C YBR298C-AQ8TGK4 73 aa3.56□□□□□ -1.84
SRB7YDR308C RPL31BP0C2H9 113 aaKnown RBP3.55□□□□□ -1.84
SRB7YDR308C AMD1P15274 810 aaKnown RBP3.55□□□□□ -1.84
SRB7YDR308C MCK1P21965 375 aaKnown RBP3.55□□□□□ -1.84
SRB7YDR308C AGA1P32323 725 aa3.55□□□□□ -1.84
SRB7YDR308C MRE11P32829 692 aa3.55□□□□□ -1.84
SRB7YDR308C TUL1P36096 758 aa3.55□□□□□ -1.84
SRB7YDR308C VID24P38263 362 aa3.55□□□□□ -1.84
SRB7YDR308C ALG8P40351 577 aa3.55□□□□□ -1.84
SRB7YDR308C MET28P40573 187 aa3.55□□□□□ -1.84
SRB7YDR308C ROK1P45818 564 aaPredicted RBP3.55□□□□□ -1.84
SRB7YDR308C OCA1P50946 238 aaPredicted RBP3.55□□□□□ -1.84
SRB7YDR308C TWF1P53250 332 aa3.55□□□□□ -1.84
SRB7YDR308C RPM2Q02773 1202 aa3.55□□□□□ -1.84
SRB7YDR308C ERP1Q05359 219 aaKnown RBP3.55□□□□□ -1.84
SRB7YDR308C SEC39Q12745 709 aa3.55□□□□□ -1.84
SRB7YDR308C SUC2P00724 532 aa3.54□□□□□ -1.84
SRB7YDR308C SWE1P32944 819 aa3.54□□□□□ -1.84
SRB7YDR308C PMT1P33775 817 aa3.54□□□□□ -1.84
SRB7YDR308C CMC1P36064 111 aa3.54□□□□□ -1.84
SRB7YDR308C PMU1P36069 295 aa3.54□□□□□ -1.84
SRB7YDR308C KRE9P39005 276 aa3.54□□□□□ -1.84
SRB7YDR308C HXT14P42833 540 aa3.54□□□□□ -1.84
SRB7YDR308C YDL186WP48568 277 aa3.54□□□□□ -1.84
SRB7YDR308C MRPL19P53875 158 aa3.54□□□□□ -1.84
SRB7YDR308C SCW10Q04951 389 aa3.54□□□□□ -1.84
SRB7YDR308C HCR1Q05775 265 aaKnown RBP3.54□□□□□ -1.84
SRB7YDR308C BNA5Q05979 453 aa3.54□□□□□ -1.84
SRB7YDR308C MET17P06106 444 aa3.53□□□□□ -1.84
SRB7YDR308C PRP16P15938 1071 aaPredicted RBP3.53□□□□□ -1.84
SRB7YDR308C GLK1P17709 500 aaKnown RBP3.53□□□□□ -1.84
SRB7YDR308C YCR022CP25620 114 aa3.53□□□□□ -1.84
SRB7YDR308C CPR3P25719 182 aa3.53□□□□□ -1.84
SRB7YDR308C IDH2P28241 369 aaKnown RBP3.53□□□□□ -1.84
SRB7YDR308C AFG1P32317 509 aa3.53□□□□□ -1.84
SRB7YDR308C UTP9P38882 575 aaKnown RBP3.53□□□□□ -1.84
SRB7YDR308C WSC2P53832 503 aa3.53□□□□□ -1.84
SRB7YDR308C MRD1Q06106 887 aaKnown RBP3.53□□□□□ -1.84
SRB7YDR308C LEU4P06208 619 aaKnown RBP3.52□□□□□ -1.85
SRB7YDR308C FRE2P36033 711 aa3.52□□□□□ -1.85
SRB7YDR308C MUM2P38236 366 aa3.52□□□□□ -1.85
SRB7YDR308C YHR218WP38899 603 aa3.52□□□□□ -1.85
SRB7YDR308C YJL132WP47014 750 aa3.52□□□□□ -1.85
SRB7YDR308C GWT1P47026 490 aa3.52□□□□□ -1.85
SRB7YDR308C URB2P47108 1174 aa3.52□□□□□ -1.85
SRB7YDR308C IMP4P53941 290 aaKnown RBP3.52□□□□□ -1.85
SRB7YDR308C RKM5Q12367 367 aa3.52□□□□□ -1.85
SRB7YDR308C HEM2P05373 342 aa3.51□□□□□ -1.85
SRB7YDR308C ATR1P13090 542 aa3.51□□□□□ -1.85
SRB7YDR308C RPL3P14126 387 aaKnown RBP3.51□□□□□ -1.85
SRB7YDR308C CKA1P15790 372 aa3.51□□□□□ -1.85
SRB7YDR308C RAD14P28519 371 aa3.51□□□□□ -1.85
SRB7YDR308C ATP11P32453 318 aa3.51□□□□□ -1.85
SRB7YDR308C REC114P32841 428 aa3.51□□□□□ -1.85
SRB7YDR308C OTU2P38747 307 aaKnown RBP3.51□□□□□ -1.85
SRB7YDR308C ESL1P40456 1118 aa3.51□□□□□ -1.85
SRB7YDR308C SYG1P40528 902 aa3.51□□□□□ -1.85
SRB7YDR308C YGL108CP53139 140 aa3.51□□□□□ -1.85
SRB7YDR308C RED1P14291 827 aa3.5□□□□□ -1.85
SRB7YDR308C CPR1P14832 162 aaKnown RBP3.5□□□□□ -1.85
SRB7YDR308C FUN19P28003 413 aaPredicted RBP3.5□□□□□ -1.85
SRB7YDR308C ISC1P40015 477 aaKnown RBP3.5□□□□□ -1.85
SRB7YDR308C MET18P40469 1032 aa3.5□□□□□ -1.85
SRB7YDR308C YGR149WP48236 432 aa3.5□□□□□ -1.85
SRB7YDR308C MNP1P53163 194 aaPredicted RBP3.5□□□□□ -1.85
SRB7YDR308C MDM1Q01846 1127 aa3.5□□□□□ -1.85
SRB7YDR308C PIR3Q03180 325 aa3.5□□□□□ -1.85
SRB7YDR308C RHO2P06781 192 aa3.49□□□□□ -1.85
SRB7YDR308C YAR066WP0CX18 203 aa3.49□□□□□ -1.85
SRB7YDR308C YHR214WP0CX19 203 aa3.49□□□□□ -1.85
SRB7YDR308C PUT3P25502 979 aaPredicted RBP3.49□□□□□ -1.85
SRB7YDR308C SPB1P25582 841 aaPredicted RBP3.49□□□□□ -1.85
SRB7YDR308C BUB3P26449 341 aa3.49□□□□□ -1.85
SRB7YDR308C MFT1P33441 392 aaKnown RBP3.49□□□□□ -1.85
SRB7YDR308C JNM1P36224 373 aa3.49□□□□□ -1.85
SRB7YDR308C HAT2P39984 401 aa3.49□□□□□ -1.85
SRB7YDR308C YFL067WP43537 175 aa3.49□□□□□ -1.85
SRB7YDR308C IRC6P43615 237 aa3.49□□□□□ -1.85
SRB7YDR308C COS10P52924 374 aa3.49□□□□□ -1.85
SRB7YDR308C RMD9P53140 646 aaKnown RBP3.49□□□□□ -1.85
SRB7YDR308C PPH22P23595 377 aa3.48□□□□□ -1.85
SRB7YDR308C NDI1P32340 513 aa3.48□□□□□ -1.85
SRB7YDR308C FAU1P40099 211 aa3.48□□□□□ -1.85
SRB7YDR308C MKT1P40850 830 aaKnown RBP3.48□□□□□ -1.85
SRB7YDR308C VTC2P43585 828 aa3.48□□□□□ -1.85
SRB7YDR308C CAF40P53829 373 aa3.48□□□□□ -1.85
SRB7YDR308C DSL1P53847 754 aa3.48□□□□□ -1.85
SRB7YDR308C GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85 RIP-Chip
SRB7YDR308C SOV1Q04748 898 aa3.48□□□□□ -1.85
SRB7YDR308C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SRB7YDR308C KEL3Q08979 651 aaPredicted RBP3.48□□□□□ -1.85
SRB7YDR308C CTF3Q12748 733 aa3.48□□□□□ -1.85
SRB7YDR308C LPD1P09624 499 aaKnown RBP3.47□□□□□ -1.85
SRB7YDR308C SPS4P09937 338 aa3.47□□□□□ -1.85
SRB7YDR308C SRV2P17555 526 aaKnown RBP3.47□□□□□ -1.85
SRB7YDR308C CLB3P24870 427 aa3.47□□□□□ -1.85
SRB7YDR308C ROX1P25042 368 aa3.47□□□□□ -1.85
SRB7YDR308C CRM1P30822 1084 aaKnown RBP3.47□□□□□ -1.85
SRB7YDR308C LOS1P33418 1100 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms