RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeastyeast

Gene UBC13, Length 462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC13YDR092W BOR1P53838 576 aa3.2□□□□□ -1.9
UBC13YDR092W SUB1P54000 292 aaKnown RBP3.2□□□□□ -1.9
UBC13YDR092W YDR239CQ03780 787 aa3.2□□□□□ -1.9
UBC13YDR092W CFT2Q12102 859 aaPredicted RBP3.2□□□□□ -1.9
UBC13YDR092W MED1Q12321 566 aa3.2□□□□□ -1.9
UBC13YDR092W YDL007C-AQ2V2Q0 85 aa3.2□□□□□ -1.9
UBC13YDR092W MRP7P12687 371 aa3.19□□□□□ -1.9
UBC13YDR092W PUT3P25502 979 aaPredicted RBP3.19□□□□□ -1.9
UBC13YDR092W CRM1P30822 1084 aaKnown RBP3.19□□□□□ -1.9
UBC13YDR092W AGA1P32323 725 aa3.19□□□□□ -1.9
UBC13YDR092W CBP4P37267 147 aa3.19□□□□□ -1.9
UBC13YDR092W YBR139WP38109 508 aa3.19□□□□□ -1.9
UBC13YDR092W CST26P38226 397 aa3.19□□□□□ -1.9
UBC13YDR092W HAT2P39984 401 aa3.19□□□□□ -1.9
UBC13YDR092W GWT1P47026 490 aa3.19□□□□□ -1.9
UBC13YDR092W PET130P47065 347 aa3.19□□□□□ -1.9
UBC13YDR092W OGG1P53397 376 aaPredicted RBP3.19□□□□□ -1.9
UBC13YDR092W ARE2P53629 642 aaKnown RBP3.19□□□□□ -1.9
UBC13YDR092W GIS2P53849 153 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
UBC13YDR092W KEL3Q08979 651 aaPredicted RBP3.19□□□□□ -1.9
UBC13YDR092W HEM2P05373 342 aa3.18□□□□□ -1.9
UBC13YDR092W RPL31BP0C2H9 113 aaKnown RBP3.18□□□□□ -1.9
UBC13YDR092W PMR1P13586 950 aa3.18□□□□□ -1.9
UBC13YDR092W GYP6P32806 458 aa3.18□□□□□ -1.9
UBC13YDR092W CMC1P36064 111 aa3.18□□□□□ -1.9
UBC13YDR092W SRO77P38163 1010 aa3.18□□□□□ -1.9
UBC13YDR092W VID24P38263 362 aa3.18□□□□□ -1.9
UBC13YDR092W TIF5P38431 405 aaKnown RBP3.18□□□□□ -1.9
UBC13YDR092W DOT5P40553 215 aa3.18□□□□□ -1.9
UBC13YDR092W CAF130P53280 1122 aaPredicted RBP3.18□□□□□ -1.9
UBC13YDR092W MSO1P53604 210 aaKnown RBP3.18□□□□□ -1.9
UBC13YDR092W PDS5Q04264 1277 aa3.18□□□□□ -1.9
UBC13YDR092W TLG2Q08144 397 aa3.18□□□□□ -1.9
UBC13YDR092W HNT3Q08702 217 aa3.18□□□□□ -1.9
UBC13YDR092W RSA1Q08932 381 aa3.18□□□□□ -1.9
UBC13YDR092W YLL056CQ12177 298 aa3.18□□□□□ -1.9
UBC13YDR092W CTF3Q12748 733 aa3.18□□□□□ -1.9
UBC13YDR092W MES1P00958 751 aaKnown RBP3.17□□□□□ -1.9
UBC13YDR092W LEU4P06208 619 aaKnown RBP3.17□□□□□ -1.9
UBC13YDR092W MET8P15807 274 aa3.17□□□□□ -1.9
UBC13YDR092W YCR022CP25620 114 aa3.17□□□□□ -1.9
UBC13YDR092W BUB3P26449 341 aa3.17□□□□□ -1.9
UBC13YDR092W SEC66P33754 206 aa3.17□□□□□ -1.9
UBC13YDR092W FAU1P40099 211 aa3.17□□□□□ -1.9
UBC13YDR092W SPO22P40511 975 aa3.17□□□□□ -1.9
UBC13YDR092W POP1P41812 875 aa3.17□□□□□ -1.9
UBC13YDR092W YPI1P43587 155 aa3.17□□□□□ -1.9
UBC13YDR092W CAF40P53829 373 aa3.17□□□□□ -1.9
UBC13YDR092W SLG1P54867 378 aa3.17□□□□□ -1.9
UBC13YDR092W RPC11Q04307 110 aaPredicted RBP3.17□□□□□ -1.9
UBC13YDR092W SOV1Q04748 898 aa3.17□□□□□ -1.9
UBC13YDR092W MFB1Q04922 465 aa3.17□□□□□ -1.9
UBC13YDR092W ATG29Q12092 213 aa3.17□□□□□ -1.9
UBC13YDR092W RHO2P06781 192 aa3.16□□□□□ -1.9
UBC13YDR092W REC114P32841 428 aa3.16□□□□□ -1.9
UBC13YDR092W AVT5P38176 459 aa3.16□□□□□ -1.9
UBC13YDR092W NAB3P38996 802 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
UBC13YDR092W OCA1P50946 238 aaPredicted RBP3.16□□□□□ -1.9
UBC13YDR092W GIR2Q03768 265 aaPredicted RBP3.16□□□□□ -1.9
UBC13YDR092W RRN11Q04712 507 aa3.16□□□□□ -1.9
UBC13YDR092W RIM20Q12033 661 aa3.16□□□□□ -1.9
UBC13YDR092W FUN19P28003 413 aaPredicted RBP3.15□□□□□ -1.91
UBC13YDR092W RAD14P28519 371 aa3.15□□□□□ -1.91
UBC13YDR092W NDI1P32340 513 aa3.15□□□□□ -1.91
UBC13YDR092W ATP11P32453 318 aa3.15□□□□□ -1.91
UBC13YDR092W FRE2P36033 711 aa3.15□□□□□ -1.91
UBC13YDR092W OTU2P38747 307 aaKnown RBP3.15□□□□□ -1.91
UBC13YDR092W YEL057CP39983 233 aa3.15□□□□□ -1.91
UBC13YDR092W HEL2Q05580 639 aaKnown RBP3.15□□□□□ -1.91
UBC13YDR092W MRD1Q06106 887 aaKnown RBP3.15□□□□□ -1.91
UBC13YDR092W TSR2Q06672 205 aaKnown RBP3.15□□□□□ -1.91
UBC13YDR092W ARG3P05150 338 aa3.14□□□□□ -1.91
UBC13YDR092W CPR1P14832 162 aaKnown RBP3.14□□□□□ -1.91
UBC13YDR092W PCA1P38360 1216 aa3.14□□□□□ -1.91
UBC13YDR092W MET18P40469 1032 aa3.14□□□□□ -1.91
UBC13YDR092W HXT14P42833 540 aa3.14□□□□□ -1.91
UBC13YDR092W YGL108CP53139 140 aa3.14□□□□□ -1.91
UBC13YDR092W RMD9P53140 646 aaKnown RBP3.14□□□□□ -1.91
UBC13YDR092W JJJ1P53863 590 aa3.14□□□□□ -1.91
UBC13YDR092W NCS2P53923 493 aaPredicted RBP3.14□□□□□ -1.91
UBC13YDR092W PNG1Q02890 363 aa3.14□□□□□ -1.91
UBC13YDR092W PIR3Q03180 325 aa3.14□□□□□ -1.91
UBC13YDR092W RQC1Q05468 723 aaKnown RBP3.14□□□□□ -1.91
UBC13YDR092W BUD21Q08492 214 aaPredicted RBP3.14□□□□□ -1.91
UBC13YDR092W YCL021W-AQ96VH3 125 aa3.14□□□□□ -1.91
UBC13YDR092W SUP35P05453 685 aaKnown RBP3.13□□□□□ -1.91
UBC13YDR092W HIP1P06775 603 aa3.13□□□□□ -1.91
UBC13YDR092W YAR066WP0CX18 203 aa3.13□□□□□ -1.91
UBC13YDR092W YHR214WP0CX19 203 aa3.13□□□□□ -1.91
UBC13YDR092W MRP4P32902 394 aa3.13□□□□□ -1.91
UBC13YDR092W YOX1P34161 385 aa3.13□□□□□ -1.91
UBC13YDR092W SDS24P38314 527 aa3.13□□□□□ -1.91
UBC13YDR092W SYG1P40528 902 aa3.13□□□□□ -1.91
UBC13YDR092W MKT1P40850 830 aaKnown RBP3.13□□□□□ -1.91
UBC13YDR092W YFL067WP43537 175 aa3.13□□□□□ -1.91
UBC13YDR092W IRC6P43615 237 aa3.13□□□□□ -1.91
UBC13YDR092W SSN8P47821 323 aa3.13□□□□□ -1.91
UBC13YDR092W WSC2P53832 503 aa3.13□□□□□ -1.91
UBC13YDR092W IBD2P53892 351 aa3.13□□□□□ -1.91
UBC13YDR092W ODC1Q03028 310 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms