RNA–Protein interactions for RNA: YDL170W

UGA3, Transcript of Transcriptional activator for GABA-dependent induction of GABA genes, yeast

Gene UGA3, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA3	YDL170W	IRC10	Q08118	586 aa		4.15	□□□□□ -1.74
UGA3	YDL170W	DIA2	Q08496	732 aa	Predicted RBP	4.15	□□□□□ -1.74
UGA3	YDL170W	MED2	Q12124	431 aa		4.15	□□□□□ -1.74
UGA3	YDL170W	MED4	Q12343	284 aa		4.15	□□□□□ -1.74
UGA3	YDL170W	AHC1	Q12433	566 aa		4.15	□□□□□ -1.74
UGA3	YDL170W	ECM3	Q99252	613 aa		4.15	□□□□□ -1.74
UGA3	YDL170W	TY3B-G	Q99315	1547 aa		4.15	□□□□□ -1.75
UGA3	YDL170W	CHC1	P22137	1653 aa	Known RBP	4.15	□□□□□ -1.75
UGA3	YDL170W	MF(ALPHA)1	P01149	165 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	PDE2	P06776	526 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	PET111	P08468	800 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	URA4	P20051	364 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	PPH22	P23595	377 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	RDS1	P25611	832 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	HSP104	P31539	908 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	RME1	P32338	300 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	YKL070W	P36087	169 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	FAD1	P38913	306 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	FKH2	P41813	862 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	QRI1	P43123	477 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	YDR179W-A	Q03983	463 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	PDS5	Q04264	1277 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	RPC11	Q04307	110 aa	Predicted RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	SSQ1	Q05931	657 aa	Predicted RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	BCK1	Q01389	1478 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	ILV2	P07342	687 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	GPA1	P08539	472 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	PRB1	P09232	635 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	CLN1	P20437	546 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	VPS34	P22543	875 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	YCR061W	P25639	631 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	MEI5	P32489	222 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	SUA5	P32579	426 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	DSS4	P32601	143 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	MGM101	P32787	269 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	PPS1	P38148	807 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	SIP3	P38717	1229 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	ECM1	P39715	212 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	LOC1	P43586	204 aa	Predicted RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	NMD5	P46970	1048 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	COS5	P47187	383 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	GND2	P53319	492 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	MNT4	P53745	580 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	YNL247W	P53852	767 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	IPI3	P53877	555 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	ASI2	P53895	289 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	HEF3	P53978	1044 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	YMR130W	Q04223	302 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	RTN1	Q04947	295 aa	Known RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	COS7	Q07788	383 aa		4.14	□□□□□ -1.75
UGA3	YDL170W	GPN2	Q08726	347 aa	Predicted RBP	4.14	□□□□□ -1.75
UGA3	YDL170W	YLR415C	O13578	112 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	SSA3	P09435	649 aa	Known RBP	4.13	□□□□□ -1.75
UGA3	YDL170W	YML003W	P0CF16	290 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	RSR1	P13856	272 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	PEX1	P24004	1043 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	YME1	P32795	747 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	ECM4	P36156	370 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	SIC1	P38634	284 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	RPP1	P38786	293 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	BUR6	P40096	142 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	UTP18	P40362	594 aa	Predicted RBP	4.13	□□□□□ -1.75
UGA3	YDL170W	STB2	P46679	850 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	NET1	P47035	1189 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	YHC3	P47040	408 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	RPS7B	P48164	190 aa	Known RBP	4.13	□□□□□ -1.75
UGA3	YDL170W	GTO1	P48239	356 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	PGA2	P53903	129 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	REX2	P54964	269 aa	Known RBP	4.13	□□□□□ -1.75
UGA3	YDL170W	UTP6	Q02354	440 aa	Known RBP	4.13	□□□□□ -1.75
UGA3	YDL170W	ARG7	Q04728	441 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	LEA1	Q08963	238 aa	Predicted RBP	4.13	□□□□□ -1.75
UGA3	YDL170W	YOL107W	Q12239	342 aa		4.13	□□□□□ -1.75
UGA3	YDL170W	MDM20	Q12387	796 aa	Known RBP	4.13	□□□□□ -1.75
UGA3	YDL170W	SNT2	P53127	1403 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	SCH9	P11792	824 aa	Known RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	FUS3	P16892	353 aa	Known RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	UGA1	P17649	471 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	PRP4	P20053	465 aa	Known RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	PDE1	P22434	369 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	UGP1	P32861	499 aa	Known RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	BMH2	P34730	273 aa	Known RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	ZTA1	P38230	334 aa	Known RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	MNL1	P38888	796 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	PET100	P38958	111 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	END3	P39013	349 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	RTR1	P40084	226 aa	Predicted RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	MSS2	P40990	351 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	GCD14	P46959	383 aa	Predicted RBP	4.12	□□□□□ -1.75
UGA3	YDL170W	MND1	P53102	219 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	YGL114W	P53134	725 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	SPO19	Q03029	223 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	URC2	Q04411	772 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	ARR3	Q06598	404 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	SIL1	Q08199	421 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	TAF3	Q12297	353 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	TY2B-B	Q12491	1770 aa		4.12	□□□□□ -1.75
UGA3	YDL170W	ARG81	P05085	880 aa		4.11	□□□□□ -1.75
UGA3	YDL170W	ARG80	P07249	177 aa		4.11	□□□□□ -1.75
UGA3	YDL170W	RPI1	P23250	407 aa	Known RBP	4.11	□□□□□ -1.75

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