RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	YDL121C	Q07541	149 aa		3.79	□□□□□ -1.8
APA1	YCL050C	PUT3	P25502	979 aa	Predicted RBP	3.78	□□□□□ -1.8
APA1	YCL050C	AVT5	P38176	459 aa		3.78	□□□□□ -1.8
APA1	YCL050C	CST26	P38226	397 aa		3.78	□□□□□ -1.8
APA1	YCL050C	YBR225W	P38321	900 aa		3.78	□□□□□ -1.8
APA1	YCL050C	PCA1	P38360	1216 aa		3.78	□□□□□ -1.8
APA1	YCL050C	ERP2	P39704	215 aa		3.78	□□□□□ -1.8
APA1	YCL050C	HAT2	P39984	401 aa		3.78	□□□□□ -1.8
APA1	YCL050C	BOR1	P53838	576 aa		3.78	□□□□□ -1.8
APA1	YCL050C	CPR1	P14832	162 aa	Known RBP	3.77	□□□□□ -1.81
APA1	YCL050C	IMP2'	P32351	346 aa		3.77	□□□□□ -1.81
APA1	YCL050C	MRE11	P32829	692 aa		3.77	□□□□□ -1.81
APA1	YCL050C	YOX1	P34161	385 aa		3.77	□□□□□ -1.81
APA1	YCL050C	CBP4	P37267	147 aa		3.77	□□□□□ -1.81
APA1	YCL050C	MUM2	P38236	366 aa		3.77	□□□□□ -1.81
APA1	YCL050C	PDS5	Q04264	1277 aa		3.77	□□□□□ -1.81
APA1	YCL050C	TLG2	Q08144	397 aa		3.77	□□□□□ -1.81
APA1	YCL050C	CTF3	Q12748	733 aa		3.77	□□□□□ -1.81
APA1	YCL050C	YML133C	Q03099	1374 aa		3.76	□□□□□ -1.81
APA1	YCL050C	YLL067C	Q07888	1374 aa		3.76	□□□□□ -1.81
APA1	YCL050C	YLL066C	Q99208	1374 aa		3.76	□□□□□ -1.81
APA1	YCL050C	LPD1	P09624	499 aa	Known RBP	3.76	□□□□□ -1.81
APA1	YCL050C	RPL31B	P0C2H9	113 aa	Known RBP	3.76	□□□□□ -1.81
APA1	YCL050C	MET8	P15807	274 aa		3.76	□□□□□ -1.81
APA1	YCL050C	MFT1	P33441	392 aa	Known RBP	3.76	□□□□□ -1.81
APA1	YCL050C	TIF5	P38431	405 aa	Known RBP	3.76	□□□□□ -1.81
APA1	YCL050C	URB2	P47108	1174 aa		3.76	□□□□□ -1.81
APA1	YCL050C	ARE2	P53629	642 aa	Known RBP	3.76	□□□□□ -1.81
APA1	YCL050C	MFB1	Q04922	465 aa		3.76	□□□□□ -1.81
APA1	YCL050C	YDL007C-A	Q2V2Q0	85 aa		3.76	□□□□□ -1.81
APA1	YCL050C	BUB3	P26449	341 aa		3.75	□□□□□ -1.81
APA1	YCL050C	FUN19	P28003	413 aa	Predicted RBP	3.75	□□□□□ -1.81
APA1	YCL050C	FRE2	P36033	711 aa		3.75	□□□□□ -1.81
APA1	YCL050C	SDS24	P38314	527 aa		3.75	□□□□□ -1.81
APA1	YCL050C	MET28	P40573	187 aa		3.75	□□□□□ -1.81
APA1	YCL050C	OCA1	P50946	238 aa	Predicted RBP	3.75	□□□□□ -1.81
APA1	YCL050C	MSO1	P53604	210 aa	Known RBP	3.75	□□□□□ -1.81
APA1	YCL050C	PIR3	Q03180	325 aa		3.75	□□□□□ -1.81
APA1	YCL050C	HNT3	Q08702	217 aa		3.75	□□□□□ -1.81
APA1	YCL050C	KEL3	Q08979	651 aa	Predicted RBP	3.75	□□□□□ -1.81
APA1	YCL050C	RKM5	Q12367	367 aa		3.75	□□□□□ -1.81
APA1	YCL050C	SEC39	Q12745	709 aa		3.75	□□□□□ -1.81
APA1	YCL050C	YCL021W-A	Q96VH3	125 aa		3.75	□□□□□ -1.81
APA1	YCL050C	LEU4	P06208	619 aa	Known RBP	3.74	□□□□□ -1.81
APA1	YCL050C	YEL057C	P39983	233 aa		3.74	□□□□□ -1.81
APA1	YCL050C	SPO22	P40511	975 aa		3.74	□□□□□ -1.81
APA1	YCL050C	ARF3	P40994	183 aa	RIP-Chip data	3.74	□□□□□ -1.81	not detected
APA1	YCL050C	YFL067W	P43537	175 aa		3.74	□□□□□ -1.81
APA1	YCL050C	YPI1	P43587	155 aa		3.74	□□□□□ -1.81
APA1	YCL050C	TWF1	P53250	332 aa		3.74	□□□□□ -1.81
APA1	YCL050C	IMH1	Q06704	911 aa	Known RBP	3.74	□□□□□ -1.81
APA1	YCL050C	PMR1	P13586	950 aa		3.73	□□□□□ -1.81
APA1	YCL050C	NOP1	P15646	327 aa	Known RBP	3.73	□□□□□ -1.81
APA1	YCL050C	NDI1	P32340	513 aa		3.73	□□□□□ -1.81
APA1	YCL050C	ATP11	P32453	318 aa		3.73	□□□□□ -1.81
APA1	YCL050C	MRP4	P32902	394 aa		3.73	□□□□□ -1.81
APA1	YCL050C	FAU1	P40099	211 aa		3.73	□□□□□ -1.81
APA1	YCL050C	SYG1	P40528	902 aa		3.73	□□□□□ -1.81
APA1	YCL050C	MKT1	P40850	830 aa	Known RBP	3.73	□□□□□ -1.81
APA1	YCL050C	YGL242C	P53066	181 aa		3.73	□□□□□ -1.81
APA1	YCL050C	CAF40	P53829	373 aa		3.73	□□□□□ -1.81
APA1	YCL050C	TIM10	P87108	93 aa		3.73	□□□□□ -1.81
APA1	YCL050C	CRM1	P30822	1084 aa	Known RBP	3.72	□□□□□ -1.81
APA1	YCL050C	CMC1	P36064	111 aa		3.72	□□□□□ -1.81
APA1	YCL050C	ISC1	P40015	477 aa	Known RBP	3.72	□□□□□ -1.81
APA1	YCL050C	SPG5	P42933	373 aa		3.72	□□□□□ -1.81
APA1	YCL050C	BUD21	Q08492	214 aa	Predicted RBP	3.72	□□□□□ -1.81
APA1	YCL050C	RIM20	Q12033	661 aa		3.72	□□□□□ -1.81
APA1	YCL050C	ATG29	Q12092	213 aa		3.72	□□□□□ -1.81
APA1	YCL050C	MED1	Q12321	566 aa		3.72	□□□□□ -1.81
APA1	YCL050C	ARG3	P05150	338 aa		3.71	□□□□□ -1.82
APA1	YCL050C	VID24	P38263	362 aa		3.71	□□□□□ -1.82
APA1	YCL050C	AVT4	P50944	713 aa		3.71	□□□□□ -1.82
APA1	YCL050C	YGL108C	P53139	140 aa		3.71	□□□□□ -1.82
APA1	YCL050C	OGG1	P53397	376 aa	Predicted RBP	3.71	□□□□□ -1.82
APA1	YCL050C	SLG1	P54867	378 aa		3.71	□□□□□ -1.82
APA1	YCL050C	MRD1	Q06106	887 aa	Known RBP	3.71	□□□□□ -1.82
APA1	YCL050C	RRI2	Q12348	645 aa		3.71	□□□□□ -1.82
APA1	YCL050C	HIP1	P06775	603 aa		3.7	□□□□□ -1.82
APA1	YCL050C	YAR066W	P0CX18	203 aa		3.7	□□□□□ -1.82
APA1	YCL050C	YHR214W	P0CX19	203 aa		3.7	□□□□□ -1.82
APA1	YCL050C	MRP7	P12687	371 aa		3.7	□□□□□ -1.82
APA1	YCL050C	REV1	P12689	985 aa		3.7	□□□□□ -1.82
APA1	YCL050C	RNA14	P25298	677 aa	Known RBP	3.7	□□□□□ -1.82
APA1	YCL050C	DEG1	P31115	442 aa	Known RBP	3.7	□□□□□ -1.82
APA1	YCL050C	AFG1	P32317	509 aa		3.7	□□□□□ -1.82
APA1	YCL050C	PMT1	P33775	817 aa		3.7	□□□□□ -1.82
APA1	YCL050C	HXT14	P42833	540 aa		3.7	□□□□□ -1.82
APA1	YCL050C	SMA2	Q04658	369 aa		3.7	□□□□□ -1.82
APA1	YCL050C	SOV1	Q04748	898 aa		3.7	□□□□□ -1.82
APA1	YCL050C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.7	□□□□□ -1.82	not detected
APA1	YCL050C	RHO2	P06781	192 aa		3.69	□□□□□ -1.82
APA1	YCL050C	YCR100C	P25606	316 aa		3.69	□□□□□ -1.82
APA1	YCL050C	RAD14	P28519	371 aa		3.69	□□□□□ -1.82
APA1	YCL050C	GLC7	P32598	312 aa	Known RBP	3.69	□□□□□ -1.82
APA1	YCL050C	REC114	P32841	428 aa		3.69	□□□□□ -1.82
APA1	YCL050C	NAT2	P37293	288 aa		3.69	□□□□□ -1.82
APA1	YCL050C	NDT80	P38830	627 aa		3.69	□□□□□ -1.82
APA1	YCL050C	KEL1	P38853	1164 aa	Known RBP	3.69	□□□□□ -1.82
APA1	YCL050C	POP6	P53218	158 aa		3.69	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms