RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeast

Gene CKS1, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKS1	YBR135W	IAH1	P41734	238 aa		4.81	□□□□□ -1.64
CKS1	YBR135W	YNL234W	P53857	426 aa		4.81	□□□□□ -1.64
CKS1	YBR135W	YDL057W	Q07379	328 aa		4.81	□□□□□ -1.64
CKS1	YBR135W	YRF1-4	O13559	1382 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	RPL42A	P0CX27	106 aa	Known RBP	4.8	□□□□□ -1.64
CKS1	YBR135W	RPL42B	P0CX28	106 aa	Known RBP	4.8	□□□□□ -1.64
CKS1	YBR135W	RPS2	P25443	254 aa	Known RBP	4.8	□□□□□ -1.64
CKS1	YBR135W	GND1	P38720	489 aa	Known RBP	4.8	□□□□□ -1.64
CKS1	YBR135W	PCI8	P40512	444 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	RTS2	P40962	232 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	DLD2	P46681	530 aa	Known RBP	4.8	□□□□□ -1.64
CKS1	YBR135W	MDV1	P47025	714 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	BUD32	P53323	261 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	SLG1	P54867	378 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	SHR3	Q02774	210 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	MRPL1	Q04599	285 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	VTA1	Q06263	330 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	THP1	Q08231	455 aa		4.8	□□□□□ -1.64
CKS1	YBR135W	COR1	P07256	457 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	PEP5	P12868	1029 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	SGV1	P23293	657 aa	Known RBP	4.79	□□□□□ -1.64
CKS1	YBR135W	DBF4	P32325	704 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	HXT3	P32466	567 aa	Known RBP	4.79	□□□□□ -1.64
CKS1	YBR135W	PDR3	P33200	976 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	STB6	P36085	766 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	TIF4631	P39935	952 aa	Known RBP	4.79	□□□□□ -1.64
CKS1	YBR135W	YJL068C	P40363	299 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	VMA13	P41807	478 aa	Known RBP	4.79	□□□□□ -1.64
CKS1	YBR135W	ATG27	P46989	271 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	YJR154W	P47181	346 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	RSC1	P53236	928 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	ESBP6	P53918	673 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	HEF3	P53978	1044 aa	Known RBP	4.79	□□□□□ -1.64
CKS1	YBR135W	RHO4	Q00246	291 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	YPL014W	Q02606	381 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	RMT2	Q03305	412 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	ARX1	Q03862	593 aa	Known RBP	4.79	□□□□□ -1.64
CKS1	YBR135W	YLR345W	Q06137	509 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	SSK1	Q07084	712 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	ISN1	Q99312	450 aa		4.79	□□□□□ -1.64
CKS1	YBR135W	HOM3	P10869	527 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	RPL3	P14126	387 aa	Known RBP	4.78	□□□□□ -1.64
CKS1	YBR135W	CLC1	P17891	233 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	SNT1	P25357	1226 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	MCM4	P30665	933 aa	Known RBP	4.78	□□□□□ -1.64
CKS1	YBR135W	MGM1	P32266	881 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	ASK1	P35734	292 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	PHD1	P36093	366 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	SRP72	P38688	640 aa	Known RBP	4.78	□□□□□ -1.64
CKS1	YBR135W	SPC97	P38863	823 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	MBB1	P39534	108 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	YIR016W	P40572	265 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	SSU1	P41930	458 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	FET5	P43561	622 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	YML6	P51998	286 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	BNI5	P53890	448 aa	Known RBP	4.78	□□□□□ -1.64
CKS1	YBR135W	BET4	Q00618	327 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	DIC1	Q06143	298 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	KRE5	P22023	1365 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	RAV1	P47104	1357 aa		4.78	□□□□□ -1.64
CKS1	YBR135W	RAD52	P06778	471 aa	Known RBP	4.77	□□□□□ -1.65
CKS1	YBR135W	REC107	P21651	314 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	YCR051W	P25631	222 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	MSN2	P33748	704 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	SPC34	P36131	295 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	BNA4	P38169	460 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	TCM62	P38228	572 aa	Known RBP	4.77	□□□□□ -1.65
CKS1	YBR135W	MNP1	P53163	194 aa	Predicted RBP	4.77	□□□□□ -1.65
CKS1	YBR135W	ERB1	Q04660	807 aa	Known RBP	4.77	□□□□□ -1.65
CKS1	YBR135W	RSF1	Q05043	376 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	MLH2	Q07980	695 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	UBX3	Q12229	455 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	SMC6	Q12749	1114 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	PDR11	P40550	1411 aa		4.77	□□□□□ -1.65
CKS1	YBR135W	CFT1	Q06632	1357 aa	Known RBP	4.77	□□□□□ -1.65
CKS1	YBR135W	BCK1	Q01389	1478 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	YFL068W	P0CX99	160 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	YLL066W-A	P0CY00	160 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	YLL067W-A	P0CY01	160 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	SPB1	P25582	841 aa	Predicted RBP	4.76	□□□□□ -1.65
CKS1	YBR135W	PXA2	P34230	853 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	GCS1	P35197	352 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	TUL1	P36096	758 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	DUG2	P38149	878 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	ERG7	P38604	731 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	KEL1	P38853	1164 aa	Known RBP	4.76	□□□□□ -1.65
CKS1	YBR135W	YIL152W	P40455	235 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	ALT2	P52892	507 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	YGL108C	P53139	140 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	APL5	Q08951	932 aa	Known RBP	4.76	□□□□□ -1.65
CKS1	YBR135W	BSC1	Q12140	328 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	ARP6	Q12509	438 aa		4.76	□□□□□ -1.65
CKS1	YBR135W	SUC2	P00724	532 aa		4.75	□□□□□ -1.65
CKS1	YBR135W	PPH22	P23595	377 aa		4.75	□□□□□ -1.65
CKS1	YBR135W	MGR1	P25573	417 aa		4.75	□□□□□ -1.65
CKS1	YBR135W	URA7	P28274	579 aa	Known RBP	4.75	□□□□□ -1.65
CKS1	YBR135W	RAD14	P28519	371 aa		4.75	□□□□□ -1.65
CKS1	YBR135W	RML2	P32611	393 aa		4.75	□□□□□ -1.65
CKS1	YBR135W	HCS1	P34243	683 aa		4.75	□□□□□ -1.65
CKS1	YBR135W	EFM2	P38347	419 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms