RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C IBD2P53892 351 aa6.57□□□□□ -1.36
LDB7YBL006C YNL058CP53947 316 aa6.57□□□□□ -1.36
LDB7YBL006C RMI1Q02685 241 aa6.57□□□□□ -1.36
LDB7YBL006C GIP3Q03016 1276 aa6.57□□□□□ -1.36
LDB7YBL006C DFG5Q05031 458 aa6.57□□□□□ -1.36
LDB7YBL006C CDA2Q06703 312 aa6.57□□□□□ -1.36
LDB7YBL006C MMT2Q08970 484 aa6.57□□□□□ -1.36
LDB7YBL006C RUD3Q12234 484 aaKnown RBP6.57□□□□□ -1.36
LDB7YBL006C HEM2P05373 342 aa6.56□□□□□ -1.36
LDB7YBL006C RPO26P20435 155 aa6.56□□□□□ -1.36
LDB7YBL006C CHA1P25379 360 aaKnown RBP6.56□□□□□ -1.36
LDB7YBL006C CDC5P32562 705 aa6.56□□□□□ -1.36
LDB7YBL006C CBF5P33322 483 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36 RIP-Chip
LDB7YBL006C LST4P34239 828 aa6.56□□□□□ -1.36
LDB7YBL006C RPS27AP35997 82 aaKnown RBP6.56□□□□□ -1.36
LDB7YBL006C RPS27BP38711 82 aa6.56□□□□□ -1.36
LDB7YBL006C REV7P38927 245 aa6.56□□□□□ -1.36
LDB7YBL006C MIC19P43594 170 aa6.56□□□□□ -1.36
LDB7YBL006C PRP31P49704 494 aaPredicted RBP6.56□□□□□ -1.36
LDB7YBL006C AIF1P52923 378 aa6.56□□□□□ -1.36
LDB7YBL006C VPS60Q03390 229 aa6.56□□□□□ -1.36
LDB7YBL006C TPP1Q03796 238 aa6.56□□□□□ -1.36
LDB7YBL006C YDR338CQ05497 695 aa6.56□□□□□ -1.36
LDB7YBL006C CDA1Q06702 301 aa6.56□□□□□ -1.36
LDB7YBL006C REH1Q06709 432 aa6.56□□□□□ -1.36
LDB7YBL006C XYL2Q07993 356 aa6.56□□□□□ -1.36
LDB7YBL006C COX6P00427 148 aa6.55□□□□□ -1.36
LDB7YBL006C SPT3P06844 337 aa6.55□□□□□ -1.36
LDB7YBL006C CDC26P14724 124 aa6.55□□□□□ -1.36
LDB7YBL006C CPR3P25719 182 aa6.55□□□□□ -1.36
LDB7YBL006C FAA1P30624 700 aaKnown RBP6.55□□□□□ -1.36
LDB7YBL006C ERG1P32476 496 aaKnown RBP6.55□□□□□ -1.36
LDB7YBL006C PHO89P38361 574 aa6.55□□□□□ -1.36
LDB7YBL006C YJL206CP39529 758 aa6.55□□□□□ -1.36
LDB7YBL006C COA1P40452 197 aa6.55□□□□□ -1.36
LDB7YBL006C CAB2P40506 365 aa6.55□□□□□ -1.36
LDB7YBL006C AXL1P40851 1208 aa6.55□□□□□ -1.36
LDB7YBL006C URB2P47108 1174 aa6.55□□□□□ -1.36
LDB7YBL006C LCL3P53153 274 aa6.55□□□□□ -1.36
LDB7YBL006C EFM5P53200 248 aaKnown RBP6.55□□□□□ -1.36
LDB7YBL006C YMR155WQ03795 547 aa6.55□□□□□ -1.36
LDB7YBL006C GAD1Q04792 585 aa6.55□□□□□ -1.36
LDB7YBL006C MDM30Q05930 598 aa6.55□□□□□ -1.36
LDB7YBL006C RRP40Q08285 240 aaKnown RBP6.55□□□□□ -1.36
LDB7YBL006C GLO4Q12320 285 aa6.55□□□□□ -1.36
LDB7YBL006C AHA1Q12449 350 aaKnown RBP6.55□□□□□ -1.36
LDB7YBL006C YPT1P01123 206 aaKnown RBP6.54□□□□□ -1.36
LDB7YBL006C ADH7P25377 361 aa6.54□□□□□ -1.36
LDB7YBL006C MGR1P25573 417 aa6.54□□□□□ -1.36
LDB7YBL006C TAH1P25638 111 aaPredicted RBP6.54□□□□□ -1.36
LDB7YBL006C ORC2P32833 620 aa6.54□□□□□ -1.36
LDB7YBL006C SUI1P32911 108 aaKnown RBP6.54□□□□□ -1.36
LDB7YBL006C SET3P36124 751 aa6.54□□□□□ -1.36
LDB7YBL006C APT2P36973 181 aa6.54□□□□□ -1.36
LDB7YBL006C CBP4P37267 147 aa6.54□□□□□ -1.36
LDB7YBL006C MBP1P39678 833 aa6.54□□□□□ -1.36
LDB7YBL006C MET12P46151 657 aa6.54□□□□□ -1.36
LDB7YBL006C ROG1P53118 685 aa6.54□□□□□ -1.36
LDB7YBL006C NNF2P53253 936 aa6.54□□□□□ -1.36
LDB7YBL006C PRP38Q00723 242 aaPredicted RBP6.54□□□□□ -1.36
LDB7YBL006C YOL019WQ08157 551 aa6.54□□□□□ -1.36
LDB7YBL006C YOL159CQ08300 171 aa6.54□□□□□ -1.36
LDB7YBL006C BDS1Q08347 646 aa6.54□□□□□ -1.36
LDB7YBL006C RAX1Q08760 435 aa6.54□□□□□ -1.36
LDB7YBL006C YLR053CQ12026 108 aa6.54□□□□□ -1.36
LDB7YBL006C CDC9P04819 755 aa6.53□□□□□ -1.36
LDB7YBL006C KAR1P11927 433 aa6.53□□□□□ -1.36
LDB7YBL006C TRX3P25372 127 aa6.53□□□□□ -1.36
LDB7YBL006C YMC1P32331 307 aa6.53□□□□□ -1.36
LDB7YBL006C BCK2P33306 851 aa6.53□□□□□ -1.36
LDB7YBL006C ASC1P38011 319 aaKnown RBP6.53□□□□□ -1.36
LDB7YBL006C YBR071WP38243 211 aa6.53□□□□□ -1.36
LDB7YBL006C YHB1P39676 399 aaKnown RBP6.53□□□□□ -1.36
LDB7YBL006C SER3P40054 469 aa6.53□□□□□ -1.36
LDB7YBL006C NEO1P40527 1151 aa6.53□□□□□ -1.36
LDB7YBL006C GUS1P46655 708 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
LDB7YBL006C YGL176CP46945 554 aa6.53□□□□□ -1.36
LDB7YBL006C IST1P53843 298 aaPredicted RBP6.53□□□□□ -1.36
LDB7YBL006C SDH1Q00711 640 aa6.53□□□□□ -1.36
LDB7YBL006C YET2Q04210 160 aa6.53□□□□□ -1.36
LDB7YBL006C BOP2Q06150 570 aa6.53□□□□□ -1.36
LDB7YBL006C SEC10Q06245 871 aa6.53□□□□□ -1.36
LDB7YBL006C TDA5Q06417 326 aaKnown RBP6.53□□□□□ -1.36
LDB7YBL006C AKR2Q12013 749 aa6.53□□□□□ -1.36
LDB7YBL006C APC9Q12107 265 aa6.53□□□□□ -1.36
LDB7YBL006C MHT1Q12525 324 aa6.53□□□□□ -1.36
LDB7YBL006C GLT1Q12680 2145 aaKnown RBP6.52□□□□□ -1.37
LDB7YBL006C ARG4P04076 463 aaPredicted RBP6.52□□□□□ -1.37
LDB7YBL006C SPS22P25380 463 aa6.52□□□□□ -1.37
LDB7YBL006C NAM9P27929 486 aa6.52□□□□□ -1.37
LDB7YBL006C YJU2P28320 278 aaPredicted RBP6.52□□□□□ -1.37
LDB7YBL006C FUN30P31380 1131 aa6.52□□□□□ -1.37
LDB7YBL006C PMT2P31382 759 aa6.52□□□□□ -1.37
LDB7YBL006C RPS1AP33442 255 aaKnown RBP6.52□□□□□ -1.37
LDB7YBL006C PRM2P40534 656 aa6.52□□□□□ -1.37
LDB7YBL006C MAD2P40958 196 aa6.52□□□□□ -1.37
LDB7YBL006C RPL10P41805 221 aaKnown RBP6.52□□□□□ -1.37
LDB7YBL006C VMA13P41807 478 aaKnown RBP6.52□□□□□ -1.37
LDB7YBL006C TIM54P47045 478 aa6.52□□□□□ -1.37
LDB7YBL006C RCF2P53721 224 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms