RNA–Protein interactions for RNA: YAL042W

ERV46, Transcript of Protein localized to COPII-coated vesicles, yeast

Gene ERV46, Length 1,248 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERV46	YAL042W	YOL019W	Q08157	551 aa		11.28	□□□□□ -0.6
ERV46	YAL042W	GPB1	Q08886	897 aa		11.28	□□□□□ -0.6
ERV46	YAL042W	YLR049C	Q12110	428 aa		11.28	□□□□□ -0.6
ERV46	YAL042W	SLH1	P53327	1967 aa	Known RBP	11.28	□□□□□ -0.6
ERV46	YAL042W	YMR085W	P0CF18	432 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	SGV1	P23293	657 aa	Known RBP	11.27	□□□□□ -0.61
ERV46	YAL042W	TRX3	P25372	127 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	MLS1	P30952	554 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	BMT2	P38278	337 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	ELP2	P42935	788 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	SLM2	P53955	656 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	SED5	Q01590	340 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	GIP3	Q03016	1276 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	GAS3	Q03655	524 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	TVP15	Q03860	143 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	ERF2	Q06551	359 aa		11.27	□□□□□ -0.61
ERV46	YAL042W	SRB5	P32585	307 aa		11.26	□□□□□ -0.61
ERV46	YAL042W	MTG2	P38860	518 aa		11.26	□□□□□ -0.61
ERV46	YAL042W	YGR250C	P53316	781 aa	Known RBP	11.26	□□□□□ -0.61
ERV46	YAL042W	GIC2	Q06648	383 aa		11.26	□□□□□ -0.61
ERV46	YAL042W	MHT1	Q12525	324 aa		11.26	□□□□□ -0.61
ERV46	YAL042W	YCL012C	Q8J0M4	134 aa		11.26	□□□□□ -0.61
ERV46	YAL042W	PRP2	P20095	876 aa	Predicted RBP	11.25	□□□□□ -0.61
ERV46	YAL042W	LTV1	P34078	463 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	MRPL15	P36523	253 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	YRO2	P38079	344 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	FTH1	P38310	465 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	SCS2	P40075	244 aa	Known RBP	11.25	□□□□□ -0.61
ERV46	YAL042W	FAU1	P40099	211 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	MET12	P46151	657 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	MET31	Q03081	177 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	TRS23	Q03784	219 aa		11.25	□□□□□ -0.61
ERV46	YAL042W	TRP3	P00937	484 aa		11.24	□□□□□ -0.61
ERV46	YAL042W	BUB2	P26448	306 aa	Predicted RBP	11.24	□□□□□ -0.61
ERV46	YAL042W	YIL086C	P40503	102 aa		11.24	□□□□□ -0.61
ERV46	YAL042W	YGR053C	P53234	283 aa		11.24	□□□□□ -0.61
ERV46	YAL042W	NOP19	P53317	196 aa	Predicted RBP	11.24	□□□□□ -0.61
ERV46	YAL042W	RSF1	Q05043	376 aa		11.24	□□□□□ -0.61
ERV46	YAL042W	BSC2	Q05611	235 aa		11.24	□□□□□ -0.61
ERV46	YAL042W	OMS1	Q06668	471 aa		11.24	□□□□□ -0.61
ERV46	YAL042W	RRP40	Q08285	240 aa	Known RBP	11.24	□□□□□ -0.61
ERV46	YAL042W	LEU4	P06208	619 aa	Known RBP	11.23	□□□□□ -0.61
ERV46	YAL042W	DST1	P07273	309 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	SPS22	P25380	463 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	MVD1	P32377	396 aa	Known RBP	11.23	□□□□□ -0.61
ERV46	YAL042W	CDC5	P32562	705 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	PET127	P32606	800 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	HES1	P35843	434 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	YHR112C	P38716	378 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	YHR210C	P38893	341 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	MAD2	P40958	196 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	PAC11	P40960	533 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	YNL140C	P53910	189 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	BOP2	Q06150	570 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	RUP1	Q12242	671 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	FRE7	Q12333	620 aa		11.23	□□□□□ -0.61
ERV46	YAL042W	YKR078W	P36158	585 aa	Known RBP	11.22	□□□□□ -0.61
ERV46	YAL042W	PTC2	P39966	464 aa	Known RBP	11.22	□□□□□ -0.61
ERV46	YAL042W	MET18	P40469	1032 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	MEP2	P41948	499 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	SDT1	P53078	280 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	YGR266W	P53326	701 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	SDH1	Q00711	640 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	YOR389W	Q08912	624 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	MMT2	Q08970	484 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	YPL278C	Q08990	100 aa		11.22	□□□□□ -0.61
ERV46	YAL042W	FAS1	P07149	2051 aa	Known RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	HXK2	P04807	486 aa	Known RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	GCD2	P12754	651 aa	Predicted RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	MRPL32	P25348	183 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	MGR1	P25573	417 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	RPC19	P28000	142 aa	Known RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	SIN4	P32259	974 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	ERG1	P32476	496 aa	Known RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	VPS21	P36017	210 aa	Known RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	ASC1	P38011	319 aa	Known RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	BZZ1	P38822	633 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	NEO1	P40527	1151 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	11.21	□□□□□ -0.61	not detected
ERV46	YAL042W	HOC1	P47124	396 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	ASK10	P48361	1146 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	CSL4	P53859	292 aa	Predicted RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	MPS1	P54199	764 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	TEN1	Q07921	160 aa		11.21	□□□□□ -0.61
ERV46	YAL042W	NOP58	Q12499	511 aa	Known RBP	11.21	□□□□□ -0.61
ERV46	YAL042W	YBR071W	P38243	211 aa		11.2	□□□□□ -0.62
ERV46	YAL042W	RPL10	P41805	221 aa	Known RBP	11.2	□□□□□ -0.62
ERV46	YAL042W	UBP6	P43593	499 aa	Known RBP	11.2	□□□□□ -0.62
ERV46	YAL042W	TAF6	P53040	516 aa		11.2	□□□□□ -0.62
ERV46	YAL042W	ROG1	P53118	685 aa		11.2	□□□□□ -0.62
ERV46	YAL042W	YMR111C	Q04461	462 aa	Predicted RBP	11.2	□□□□□ -0.62
ERV46	YAL042W	SLF1	Q12034	447 aa	Known RBP	11.2	□□□□□ -0.62
ERV46	YAL042W	CHA1	P25379	360 aa	Known RBP	11.19	□□□□□ -0.62
ERV46	YAL042W	RIM101	P33400	625 aa		11.19	□□□□□ -0.62
ERV46	YAL042W	CAB3	P36076	571 aa		11.19	□□□□□ -0.62
ERV46	YAL042W	YBR062C	P38239	180 aa		11.19	□□□□□ -0.62
ERV46	YAL042W	YNL010W	P53981	241 aa	Known RBP	11.19	□□□□□ -0.62
ERV46	YAL042W	RSM10	Q03201	203 aa		11.19	□□□□□ -0.62
ERV46	YAL042W	VID22	Q05934	901 aa		11.19	□□□□□ -0.62
ERV46	YAL042W	PDR8	Q06149	701 aa		11.19	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms