RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 SRP68Q9UHB9 627 aaKnown RBP7.61□□□□□ -1.19
ATM-229ENST00000639953 LRIG2O94898 1065 aa7.6□□□□□ -1.19
ATM-229ENST00000639953 SNRPA1P09661 255 aaKnown RBP7.6□□□□□ -1.19
ATM-229ENST00000639953 KCT2Q8NC54 265 aa7.6□□□□□ -1.19
ATM-229ENST00000639953 MTFR1LQ9H019 292 aa7.6□□□□□ -1.19
ATM-229ENST00000639953 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
ATM-229ENST00000639953 SOS1Q07889 1333 aaPredicted RBP7.59□□□□□ -1.19
ATM-229ENST00000639953 CHL1O00533 1208 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 FARP2O94887 1054 aaPredicted RBP7.59□□□□□ -1.19
ATM-229ENST00000639953 LDHBP07195 334 aaKnown RBP7.59□□□□□ -1.19
ATM-229ENST00000639953 RGS3P49796 1198 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 MVPQ14764 893 aaKnown RBP7.59□□□□□ -1.19
ATM-229ENST00000639953 CDKAL1Q5VV42 579 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 FYB2Q5VWT5 728 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 ZKSCAN2Q63HK3 967 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 SCARA3Q6AZY7 606 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 CENPQQ7L2Z9 268 aaPredicted RBP7.59□□□□□ -1.19
ATM-229ENST00000639953 G2E3Q7L622 706 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 HDXQ7Z353 690 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 HSPA12BQ96MM6 686 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 WNT10AQ9GZT5 417 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 PRDM5Q9NQX1 630 aaPredicted RBP7.59□□□□□ -1.19
ATM-229ENST00000639953 SEMA3GQ9NS98 782 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 SMC4Q9NTJ3 1288 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.59□□□□□ -1.19
ATM-229ENST00000639953 PCDHB5Q9Y5E4 795 aa7.59□□□□□ -1.19
ATM-229ENST00000639953 COL15A1P39059 1388 aa7.59□□□□□ -1.2
ATM-229ENST00000639953 GOLGB1Q14789 3259 aaKnown RBP7.58□□□□□ -1.2
ATM-229ENST00000639953 PITPNM2Q9BZ72 1349 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 STARD3NLO95772 234 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 GYS1P13807 737 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 RFC4P35249 363 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 TTBK2Q6IQ55 1244 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 SV2BQ7L1I2 683 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 SIRT2Q8IXJ6 389 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.58□□□□□ -1.2
ATM-229ENST00000639953 GAL3ST3Q96A11 431 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 MIPEPQ99797 713 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 TEX13AQ9BXU3 409 aaPredicted RBP7.58□□□□□ -1.2
ATM-229ENST00000639953 IFT57Q9NWB7 429 aa7.58□□□□□ -1.2
ATM-229ENST00000639953 PPP1R1BQ9UD71 204 aaPredicted RBP7.58□□□□□ -1.2
ATM-229ENST00000639953 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
ATM-229ENST00000639953 BCORQ6W2J9 1755 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 ZNF503-AS2A6NEH8 195 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 ANXA1P04083 346 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 MYL6BP14649 208 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 EIF2S2P20042 333 aaKnown RBP7.57□□□□□ -1.2
ATM-229ENST00000639953 HMGB2P26583 209 aaKnown RBP7.57□□□□□ -1.2
ATM-229ENST00000639953 EIF5P55010 431 aaKnown RBP7.57□□□□□ -1.2
ATM-229ENST00000639953 ETF1P62495 437 aaKnown RBP7.57□□□□□ -1.2
ATM-229ENST00000639953 FGD1P98174 961 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 WIPI1Q5MNZ9 446 aaPredicted RBP7.57□□□□□ -1.2
ATM-229ENST00000639953 ATF7IPQ6VMQ6 1270 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 XAGE3Q8WTP9 111 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 CARS2Q9HA77 564 aaKnown RBP7.57□□□□□ -1.2
ATM-229ENST00000639953 ATP13A1Q9HD20 1204 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 ZBTB40Q9NUA8 1239 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 BABAM1Q9NWV8 329 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 CTNND2Q9UQB3 1225 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 SCN7AQ01118 1682 aa7.57□□□□□ -1.2
ATM-229ENST00000639953 USP42Q9H9J4 1324 aaKnown RBP7.56□□□□□ -1.2
ATM-229ENST00000639953 POLD1P28340 1107 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 IL6STP40189 918 aaPredicted RBP7.56□□□□□ -1.2
ATM-229ENST00000639953 CLCN7P51798 805 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 GNAI1P63096 354 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 KCNA1Q09470 495 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 SFRP5Q5T4F7 317 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 NPM2Q86SE8 214 aaKnown RBP7.56□□□□□ -1.2
ATM-229ENST00000639953 ZSWIM9Q86XI8 627 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 MAPK8IP1Q9UQF2 711 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
ATM-229ENST00000639953 AFDNP55196 1824 aaKnown RBP7.55□□□□□ -1.2
ATM-229ENST00000639953 LRRC10BA6NIK2 292 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 FAM155AB1AL88 458 aaPredicted RBP7.55□□□□□ -1.2
ATM-229ENST00000639953 H3BS24 57 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 CBX7O95931 251 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 MMP10P09238 476 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 CT47B1P0C2W7 299 aaPredicted RBP7.55□□□□□ -1.2
ATM-229ENST00000639953 GRK4P32298 578 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 CALD1Q05682 793 aaKnown RBP7.55□□□□□ -1.2
ATM-229ENST00000639953 MESP2Q0VG99 397 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 SEPT6Q14141 434 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 KCNMB1Q16558 191 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 MAP3K11Q16584 847 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 MLANAQ16655 118 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 PROSER3Q2NL68 480 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 TWISTNBQ3B726 338 aaPredicted RBP7.55□□□□□ -1.2
ATM-229ENST00000639953 ALDH1L2Q3SY69 923 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 HID1Q8IV36 788 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 KSR1Q8IVT5 923 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 LIN37Q96GY3 246 aaPredicted RBP7.55□□□□□ -1.2
ATM-229ENST00000639953 NARFQ9UHQ1 456 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 NUP98P52948 1817 aa7.55□□□□□ -1.2
ATM-229ENST00000639953 GFRA2O00451 464 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 CAMTA2O94983 1202 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 EIF4BP23588 611 aaKnown RBP7.54□□□□□ -1.2
ATM-229ENST00000639953 DDR1Q08345 913 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms