RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ZBTB7AO95365 584 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 EMP3P54852 163 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 ERVK-21P61565 698 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 HIF1AQ16665 826 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 BTLAQ7Z6A9 289 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 PNMA8AQ86V59 439 aaPredicted RBP8.75□□□□□ -1.01
NECAP1-220ENST00000639841 AIFM3Q96NN9 605 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 CDK15Q96Q40 435 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 MYD88Q99836 296 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 DACH1Q9UI36 760 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 GIT1Q9Y2X7 761 aa8.75□□□□□ -1.01
NECAP1-220ENST00000639841 FCF1Q9Y324 198 aaKnown RBP8.75□□□□□ -1.01
NECAP1-220ENST00000639841 TRAV20A0A0B4J274 112 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 J3KRW8 73 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 LTFP02788 710 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 RPN1P04843 607 aaKnown RBP8.74□□□□□ -1.01
NECAP1-220ENST00000639841 C6orf222P0C671 652 aaPredicted RBP8.74□□□□□ -1.01
NECAP1-220ENST00000639841 PYGMP11217 842 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 IL2RBP14784 551 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 ITPKAP23677 461 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 NUCB1Q02818 461 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 SCUBE1Q8IWY4 988 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 NELL1Q92832 810 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 GAL3ST3Q96A11 431 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 RETREG1Q9H6L5 497 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 VTA1Q9NP79 307 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 DNM3Q9UQ16 869 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 APOBEC2Q9Y235 224 aaKnown RBP8.74□□□□□ -1.01
NECAP1-220ENST00000639841 KTN1Q86UP2 1357 aaKnown RBP8.74□□□□□ -1.01
NECAP1-220ENST00000639841 RGPD5Q99666 1765 aa8.74□□□□□ -1.01
NECAP1-220ENST00000639841 SOWAHBA6NEL2 793 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 ZEB2O60315 1214 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 CCT5P48643 541 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 CDC37Q16543 378 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 SPRED3Q2MJR0 410 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 B3GNT9Q6UX72 402 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 CHST15Q7LFX5 561 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 SLC41A1Q8IVJ1 513 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 TAB3Q8N5C8 712 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 TBATAQ96M53 351 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 SLC52A2Q9HAB3 445 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 GPR52Q9Y2T5 361 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 NSD3Q9BZ95 1437 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 SRCAPQ6ZRS2 3230 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 METTL12A8MUP2 240 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 JMJD7P0C870 316 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 ACPPP15309 386 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 ZKSCAN1P17029 563 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 BMP6P22004 513 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 IREB2P48200 963 aaKnown RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 NRLP54845 237 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 RBM10P98175 930 aaKnown RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 TBX2Q13207 712 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 WDR45BQ5MNZ6 344 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 MZT2BQ6NZ67 158 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 RSRC2Q7L4I2 434 aaKnown RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 ZSCAN30Q86W11 494 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 KIAA1958Q8N8K9 716 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 FLAD1Q8NFF5 587 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 SCLYQ96I15 445 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 ZKSCAN3Q9BRR0 538 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 GSX2Q9BZM3 304 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 SLC6A16Q9GZN6 736 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 TRMT13Q9NUP7 481 aaKnown RBP8.73□□□□□ -1.01
NECAP1-220ENST00000639841 LTN1O94822 1766 aa8.73□□□□□ -1.01
NECAP1-220ENST00000639841 EDC4Q6P2E9 1401 aaKnown RBP8.72□□□□□ -1.01
NECAP1-220ENST00000639841 CGNL1Q0VF96 1302 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 RHCEP18577 417 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 RECQLP46063 649 aaPredicted RBP8.72□□□□□ -1.01
NECAP1-220ENST00000639841 SKOR1P84550 965 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 RHDQ02161 417 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 GPR162Q16538 588 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 CMTR2Q8IYT2 770 aaKnown RBP8.72□□□□□ -1.01
NECAP1-220ENST00000639841 CCDC116Q8IYX3 515 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 SGCZQ96LD1 299 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 CRB3Q9BUF7 120 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 OPA1O60313 960 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 CCND1P24385 295 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 TM4SF4P48230 202 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 SPECC1Q5M775 1068 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 IFFO2Q5TF58 517 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 TSHZ3Q63HK5 1081 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 OR8H2Q8N162 312 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 FAM43AQ8N2R8 423 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 GSTCDQ8NEC7 633 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 CDK5RAP3Q96JB5 506 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 AARSD1Q9BTE6 412 aaKnown RBP8.72□□□□□ -1.01
NECAP1-220ENST00000639841 PHAXQ9H814 394 aaKnown RBP8.72□□□□□ -1.01
NECAP1-220ENST00000639841 ZFYVE1Q9HBF4 777 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 SLC12A7Q9Y666 1083 aa8.72□□□□□ -1.01
NECAP1-220ENST00000639841 LY75O60449 1722 aa8.71□□□□□ -1.01
NECAP1-220ENST00000639841 hCG_1642624A0A1W2PR95 340 aa8.71□□□□□ -1.02
NECAP1-220ENST00000639841 EGFRP00533 1210 aa8.71□□□□□ -1.02
NECAP1-220ENST00000639841 ASLP04424 464 aa8.71□□□□□ -1.02
NECAP1-220ENST00000639841 LMNB1P20700 586 aa8.71□□□□□ -1.02
NECAP1-220ENST00000639841 PTPN11Q06124 597 aaPredicted RBP8.71□□□□□ -1.02
NECAP1-220ENST00000639841 ARMCX6Q7L4S7 300 aa8.71□□□□□ -1.02
NECAP1-220ENST00000639841 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms