RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 STK17AQ9UEE5 414 aa21.14■□□□□ 0.97
CROCCP2-206ENST00000639594 CTAGE9A4FU28 777 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 NKRFO15226 690 aaKnown RBP eCLIP21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 SEC31AO94979 1220 aaKnown RBP21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 NPR1P16066 1061 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 NFIAQ12857 509 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 COBLL1Q53SF7 1204 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 UTP14CQ5TAP6 766 aaKnown RBP21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 KCTD1Q719H9 257 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 ZFPM1Q8IX07 1006 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 LARP4BQ92615 738 aaKnown RBP21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 RABGGTAQ92696 567 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 SEMA6BQ9H3T3 888 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 USP17L10C9JJH3 530 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 PPP1R2P41236 205 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 MTIF2P46199 727 aaKnown RBP21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 CLK2P49760 499 aaKnown RBP21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 TBC1D8BQ0IIM8 1120 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 CCDC96Q2M329 555 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 MIIPQ5JXC2 388 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 PPP1R18Q6NYC8 613 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 HHIPL2Q6UWX4 724 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 C10orf71Q711Q0 1435 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 DYMQ7RTS9 669 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 SRGAP1Q7Z6B7 1085 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 TEKT1Q969V4 418 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 CDK5RAP3Q96JB5 506 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 TTYH3Q9C0H2 523 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 AGPAT5Q9NUQ2 364 aa21.13■□□□□ 0.97
CROCCP2-206ENST00000639594 PDIA5Q14554 519 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 FAM114A1Q8IWE2 563 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 PARD6BQ9BYG5 372 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 KCNQ5Q9NR82 932 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 PUF60Q9UHX1 559 aaKnown RBP21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 PRDM4Q9UKN5 801 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 G3V3G9 751 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 HLA-DOAP06340 250 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 PDE6BP35913 854 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 DCAF8Q5TAQ9 597 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 UNC13DQ70J99 1090 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 NOC4LQ9BVI4 516 aaKnown RBP21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 ST7Q9NRC1 585 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 TRIM10Q9UDY6 481 aa21.12■□□□□ 0.97
CROCCP2-206ENST00000639594 CHMP4BP1P59074 171 aa21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 GABPB1Q06547 395 aaPredicted RBP21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 TSR1Q2NL82 804 aaKnown RBP21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 GPATCH4Q5T3I0 446 aaKnown RBP21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 CENPPQ6IPU0 288 aa21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 KCNK18Q7Z418 384 aa21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 SNX29Q8TEQ0 813 aa21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 RAD54LQ92698 747 aa21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 CUL5Q93034 780 aa21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 NAPGQ99747 312 aaPredicted RBP21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 RAB34Q9BZG1 259 aa21.11■□□□□ 0.97
CROCCP2-206ENST00000639594 PVALEFA0A1B0GWK0 134 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 ZBTB5O15062 677 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 TFRCP02786 760 aaKnown RBP21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 PPP4R3AQ6IN85 833 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 GJA10Q969M2 543 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 MYO1AQ9UBC5 1043 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 PCDHAC2Q9Y5I4 1007 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 SCN9AQ15858 1988 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 TRIM21P19474 475 aaKnown RBP21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 CRKP46108 304 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 PLA2G4AP47712 749 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 HERVK_113P62684 666 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 ECM1Q16610 540 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 KRT79Q5XKE5 535 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 CC2D1AQ6P1N0 951 aaPredicted RBP21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 CEP112Q8N8E3 955 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 HAS1Q92839 578 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 MTMR8Q96EF0 704 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 NUP58Q9BVL2 599 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 DNAJC18Q9H819 358 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 DBNDD1Q9H9R9 158 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 DDX25Q9UHL0 483 aaKnown RBP21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 GUCA1BQ9UMX6 200 aa21.1■□□□□ 0.97
CROCCP2-206ENST00000639594 TUBB2AQ13885 445 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 MEA1Q16626 185 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 SHROOM1Q2M3G4 852 aaPredicted RBP21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 TMEM119Q4V9L6 283 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 ZSCAN29Q8IWY8 852 aaPredicted RBP21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 TUBB2BQ9BVA1 445 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 SLX4Q8IY92 1834 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 FAM196BA6NMK8 535 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 MRPL12P52815 198 aaKnown RBP21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 CACNB3P54284 484 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 PCMTD1Q96MG8 357 aaPredicted RBP21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 PSTPIP2Q9H939 334 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 TFR2Q9UP52 801 aa21.09■□□□□ 0.97
CROCCP2-206ENST00000639594 C2CD5Q86YS7 1000 aa21.08■□□□□ 0.97
CROCCP2-206ENST00000639594 RETREG2Q8NC44 543 aa21.08■□□□□ 0.97
CROCCP2-206ENST00000639594 DDX12PQ92771 950 aa21.08■□□□□ 0.97
CROCCP2-206ENST00000639594 ZNF622Q969S3 477 aaKnown RBP eCLIP21.08■□□□□ 0.971e-15■□□□□ 8.7
CROCCP2-206ENST00000639594 ERGIC2Q96RQ1 377 aa21.08■□□□□ 0.97
CROCCP2-206ENST00000639594 EHD4Q9H223 541 aa21.08■□□□□ 0.97
CROCCP2-206ENST00000639594 ZNF646O15015 1829 aaPredicted RBP21.08■□□□□ 0.96
CROCCP2-206ENST00000639594 IDEP14735 1019 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms