RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 SYN1P17600 705 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 SMARCA1P28370 1054 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 RTP1P59025 263 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 BEX3Q00994 111 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 KCNA10Q16322 511 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 SEPT14Q6ZU15 432 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 SMARCC2Q8TAQ2 1214 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 MAF1Q9H063 256 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 STARD7Q9NQZ5 370 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 COL20A1Q9P218 1284 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 A0A1W2PQ45 241 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 A0A1W2PQY0 241 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 HSD17B4P51659 736 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 ACLYP53396 1101 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 STXBP2Q15833 593 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 OR6J1Q8NGC5 347 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 SCFD2Q8WU76 684 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 GLT1D1Q96MS3 346 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 IWS1Q96ST2 819 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 UPF3BQ9BZI7 483 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 PRDM5Q9NQX1 630 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 PXMP2Q9NR77 195 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 PHF24Q9UPV7 400 aa16.62■□□□□ 0.25
CACNA1A-249ENST00000637777 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 MOXD2PA6NHM9 499 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 OPLAHO14841 1288 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 ASGR1P07306 291 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 PTGS1P23219 599 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 GJA9P57773 515 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 IRX5P78411 483 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 AKAP17AQ02040 695 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 FSCN1Q16658 493 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 TRIM60Q495X7 471 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 BRDTQ58F21 947 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 SLC39A5Q6ZMH5 540 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 SAMD3Q8N6K7 520 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 TSEN34Q9BSV6 310 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 MAP3K20Q9NYL2 800 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
CACNA1A-249ENST00000637777 PQBP1O60828 265 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 NR3C2P08235 984 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 EDNRBP24530 442 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 CCND2P30279 289 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 NAPAP54920 295 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 KLHDC9Q8NEP7 349 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 GNEQ9Y223 722 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 KIAA1217Q5T5P2 1943 aa16.6■□□□□ 0.25
CACNA1A-249ENST00000637777 NKRFO15226 690 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 CST5P28325 142 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 CPT1AP50416 773 aa16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 TMEM63BQ5T3F8 832 aa16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 PSTPIP2Q9H939 334 aa16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 PDRG1Q9NUG6 133 aa16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 V9GY48 417 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-249ENST00000637777 EIF3JO75822 258 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 MYL3P08590 195 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 CDC27P30260 824 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 ADD1P35611 737 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 RCAN1P53805 252 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 CCT2P78371 535 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 PGM5Q15124 567 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 CXCL17Q6UXB2 119 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 LBHD1Q9BQE6 289 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 Q9Y3F1 56 aa16.58■□□□□ 0.24
CACNA1A-249ENST00000637777 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 STK3Q13188 491 aa16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 LY6KQ17RY6 165 aa16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 COPS5Q92905 334 aa16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 ZFP91Q96JP5 570 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 LARP6Q9BRS8 491 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 TM6SF1Q9BZW5 370 aa16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 EHMT1Q9H9B1 1298 aa16.57■□□□□ 0.24
CACNA1A-249ENST00000637777 DNAH12Q6ZR08 3092 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 RBM47A0AV96 593 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 DCDC2CA8MYV0 355 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 CPLX1O14810 134 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 SORBS3O60504 671 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 GH1P01241 217 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 MDM2Q00987 491 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 GHRHRQ02643 423 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 TLE2Q04725 743 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 UBE2SQ16763 222 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms