RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 TOMM22Q9NS69 142 aa9.74□□□□□ -0.85
SMARCA2-260ENST00000637352 ADD3Q9UEY8 706 aaKnown RBP9.74□□□□□ -0.85
SMARCA2-260ENST00000637352 DDX19BQ9UMR2 479 aa9.74□□□□□ -0.85
SMARCA2-260ENST00000637352 H3BQ06 376 aaPredicted RBP9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 SLC3A2P08195 630 aaKnown RBP9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 TXNP10599 105 aaKnown RBP9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 BRDTQ58F21 947 aaPredicted RBP9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 RRP12Q5JTH9 1297 aaKnown RBP9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 SYDE2Q5VT97 1194 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 NFRKBQ6P4R8 1299 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 RNF207Q6ZRF8 634 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 GJD3Q8N144 294 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 AFG1LQ8WV93 481 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 ALG1Q9BT22 464 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 RANBP17Q9H2T7 1088 aaKnown RBP9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 SYNPO2Q9UMS6 1093 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 PLIN4Q96Q06 1357 aa9.73□□□□□ -0.85
SMARCA2-260ENST00000637352 RBM47A0AV96 593 aaKnown RBP9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 LINC01553A4QN01 128 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 SORBS3O60504 671 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 PLA2G6O60733 806 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 NBNO60934 754 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 BAIAP3O94812 1187 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 CSPG5O95196 566 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 RPS6P62753 249 aaKnown RBP9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 LY6KQ17RY6 165 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 C20orf194Q5TEA3 1177 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 SEPT14Q6ZU15 432 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 FAM178BQ8IXR5 827 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 TET1Q8NFU7 2136 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 CLEC4DQ8WXI8 215 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 DHX38Q92620 1227 aaKnown RBP9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 TGS1Q96RS0 853 aaKnown RBP9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 CTAGE1Q96RT6 745 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 C17orf80Q9BSJ5 609 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 RAD50Q92878 1312 aa9.72□□□□□ -0.85
SMARCA2-260ENST00000637352 A6NJR5 290 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 PRR33A8MZF0 331 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 ZFYP08048 801 aaPredicted RBP9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 SELPP16109 830 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 MRE11P49959 708 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 ZNF200P98182 395 aaPredicted RBP9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 USH1GQ495M9 461 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 VPS53Q5VIR6 699 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 CNKSR3Q6P9H4 555 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 SCFD2Q8WU76 684 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 TBC1D5Q92609 795 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 CPVLQ9H3G5 476 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 HDAC6Q9UBN7 1215 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 MYH7P12883 1935 aa9.71□□□□□ -0.86
SMARCA2-260ENST00000637352 LCTP09848 1927 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 MUC6Q6W4X9 2439 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 NKRFO15226 690 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 GJB5O95377 273 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 MMP3P08254 477 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 MS4A1P11836 297 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 CKBP12277 381 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 ERVK-21P61565 698 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 LEXMQ3ZCV2 418 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 MYOCDQ8IZQ8 938 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 CCDC155Q8N6L0 562 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 CAGE1Q8TC20 777 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 OTUD7AQ8TE49 926 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 AFAP1L1Q8TED9 768 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 DCAF4Q8WV16 495 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 KAT2BQ92831 832 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 WNT8BQ93098 351 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 GPATCH3Q96I76 525 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 FBXL18Q96ME1 805 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 RAD9AQ99638 391 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 TMEM47Q9BQJ4 181 aa9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 COL4A4P53420 1690 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-260ENST00000637352 FOXP2O15409 715 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 KPNA6O60684 536 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 ZNF286BP0CG31 522 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 PTPN11Q06124 597 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 CLUL1Q15846 466 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 LRRFIP1Q32MZ4 808 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 ZNF618Q5T7W0 954 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 BTNL9Q6UXG8 535 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 C7orf31Q8N865 590 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 TAAR1Q96RJ0 339 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 LMCD1Q9NZU5 365 aa9.69□□□□□ -0.86
SMARCA2-260ENST00000637352 BRWD1Q9NSI6 2320 aa9.68□□□□□ -0.86
SMARCA2-260ENST00000637352 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
SMARCA2-260ENST00000637352 UPP2O95045 317 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms