RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 RBM12Q9NTZ6 932 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 UTRNP46939 3433 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 KLRC4O43908 158 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 AKR1B10O60218 316 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 CCNE1P24864 410 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 ARFGAP2Q8N6H7 521 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 P2RX5Q93086 422 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 ATP6V1G3Q96LB4 118 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 MROH5Q6ZUA9 1318 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 GOLGA6L7A0A1B0GV03 622 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 DDAH1O94760 285 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 FGFR2P21802 821 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 PREPLQ4J6C6 727 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 BANK1Q8NDB2 785 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 PSMB7Q99436 277 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 ACTR5Q9H9F9 607 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 TROAPQ12815 778 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 CCDC13Q8IYE1 715 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 WHAMMQ8TF30 809 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 ARHGAP20Q9P2F6 1191 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 NFU1Q9UMS0 254 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 KCPQ6ZWJ8 1503 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 TMCO5BA8MYB1 307 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 RASSF9O75901 435 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 PLEKP08567 350 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 PPP4R3AQ6IN85 833 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 DTHD1Q6ZMT9 781 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 CCDC50Q8IVM0 306 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 RNF10Q8N5U6 811 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 NOX5Q96PH1 765 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 CD248Q9HCU0 757 aa17.24■□□□□ 0.35
CACNA1A-235ENST00000637004 GOLGA6L10A6NI86 522 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 SCG2P13521 617 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 UBA7P41226 1012 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 MAGEA1P43355 309 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 CARSP49589 748 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 IFT88Q13099 833 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 MIIPQ5JXC2 388 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 C3orf20Q8ND61 904 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 EPB41L5Q9HCM4 733 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 KBTBD4Q9NVX7 518 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 SMARCAL1Q9NZC9 954 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 PJA2O43164 708 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 HEXIM1O94992 359 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 GLI1P08151 1106 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 CALML3P27482 149 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 NF2P35240 595 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 EIF4A3P38919 411 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 CEP85LQ5SZL2 805 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 CCDC121Q6ZUS5 278 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 C4orf32Q8N8J7 132 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 MIGA1Q8NAN2 632 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 IFT81Q8WYA0 676 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 TLR10Q9BXR5 811 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 MCM8Q9UJA3 840 aa17.23■□□□□ 0.35
CACNA1A-235ENST00000637004 CNTNAP5Q8WYK1 1306 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 TNS2Q63HR2 1409 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 GUCY2DQ02846 1103 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 GIGYF2Q6Y7W6 1299 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 MAGEF1Q9HAY2 307 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 E7EVH7 732 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 ELF1P32519 619 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 HDLBPQ00341 1268 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 NLRP10Q86W26 655 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 PIGBQ92521 554 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 CUEDC2Q9H467 287 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 ASAP1Q9ULH1 1129 aa17.22■□□□□ 0.35
CACNA1A-235ENST00000637004 SEC24CP53992 1094 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 ANKRD40Q6AI12 368 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 C6orf89Q6UWU4 347 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 CCDC84Q86UT8 332 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 CCDC114Q96M63 670 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 LRP2BPQ9P2M1 347 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 BRWD3Q6RI45 1802 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 FAM153BP0C7A2 387 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 FAM153CQ494X1 144 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 WLSQ5T9L3 541 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 HELBQ8NG08 1087 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 PIK3R5Q8WYR1 880 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 SLC40A1Q9NP59 571 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 FAM153AQ9UHL3 310 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 UBR2Q8IWV8 1755 aa17.21■□□□□ 0.35
CACNA1A-235ENST00000637004 GRID2IPA4D2P6 1211 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 NCK2O43639 380 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 PFKFB3Q16875 520 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms