RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ASTN2O75129 1339 aaPredicted RBP12.93□□□□□ -0.34
CLN6-217ENST00000636964 hCG_1984214I3L0E3 225 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 EDIL3O43854 480 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 OR52Z1P0C646 297 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 CDC25BP30305 580 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 UBA7P41226 1012 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLN6-217ENST00000636964 MORC3Q14149 939 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 PTPN21Q16825 1174 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 KLHL10Q6JEL2 608 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 SH3RF1Q7Z6J0 888 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 ELOA2Q8IYF1 753 aaPredicted RBP12.93□□□□□ -0.34
CLN6-217ENST00000636964 ZNF713Q8N859 430 aaPredicted RBP12.93□□□□□ -0.34
CLN6-217ENST00000636964 GJA10Q969M2 543 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 RIC8AQ9NPQ8 531 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 FANCLQ9NW38 375 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 KIF13BQ9NQT8 1826 aa12.93□□□□□ -0.34
CLN6-217ENST00000636964 TRIM66O15016 1216 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 SLC37A4O43826 429 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 COBLO75128 1261 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 BMP3P12645 472 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 STAT6P42226 847 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 CUL4BQ13620 913 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 NT5DC1Q5TFE4 455 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 CUL5Q93034 780 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 FANCGO15287 622 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 TXLNAP40222 546 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 MYL5Q02045 173 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 CCDC34Q96HJ3 373 aa12.92□□□□□ -0.34
CLN6-217ENST00000636964 GLIS2Q9BZE0 524 aaPredicted RBP12.92□□□□□ -0.34
CLN6-217ENST00000636964 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
CLN6-217ENST00000636964 DPYDQ12882 1025 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 RASA3Q14644 834 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 TBC1D10BQ4KMP7 808 aaPredicted RBP12.91□□□□□ -0.34
CLN6-217ENST00000636964 SYT10Q6XYQ8 523 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 FAM177A1Q8N128 213 aaPredicted RBP12.91□□□□□ -0.34
CLN6-217ENST00000636964 ZCCHC17Q9NP64 241 aaKnown RBP12.91□□□□□ -0.34
CLN6-217ENST00000636964 ZBTB21Q9ULJ3 1066 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 NOP2P46087 812 aaKnown RBP12.91□□□□□ -0.34
CLN6-217ENST00000636964 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
CLN6-217ENST00000636964 STX17P56962 302 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 TPM4P67936 248 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 GMCL1P1Q8NEA9 526 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 SPATA20Q8TB22 786 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 SGIP1Q9BQI5 828 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 UBXN6Q9BZV1 441 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 IKBKBO14920 756 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
CLN6-217ENST00000636964 GYS2P54840 703 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
CLN6-217ENST00000636964 TNIP1Q15025 636 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 LRRC15Q8TF66 581 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 MRFAP1L1Q96HT8 127 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 DISC1Q9NRI5 854 aa12.91□□□□□ -0.34
CLN6-217ENST00000636964 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
CLN6-217ENST00000636964 FANCCQ00597 558 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 DHX8Q14562 1220 aaKnown RBP12.9□□□□□ -0.34
CLN6-217ENST00000636964 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 SYDE2Q5VT97 1194 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 E4F1Q66K89 784 aaPredicted RBP12.9□□□□□ -0.34
CLN6-217ENST00000636964 MICALL2Q8IY33 904 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 MTMR14Q8NCE2 650 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 MED15Q96RN5 788 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 SASH3O75995 380 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 PTGER2P43116 358 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 CALCRLQ16602 461 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 NAALADL2Q58DX5 795 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 CREBRFQ8IUR6 639 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 MLKLQ8NB16 471 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 DPF2Q92785 391 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
CLN6-217ENST00000636964 ZBED3Q96IU2 234 aaPredicted RBP12.9□□□□□ -0.34
CLN6-217ENST00000636964 LAD1O00515 517 aa12.9□□□□□ -0.35
CLN6-217ENST00000636964 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.35
CLN6-217ENST00000636964 SEC31AO94979 1220 aaKnown RBP12.9□□□□□ -0.35
CLN6-217ENST00000636964 SERPINC1P01008 464 aa12.9□□□□□ -0.35
CLN6-217ENST00000636964 CLK2P49760 499 aaKnown RBP12.9□□□□□ -0.35
CLN6-217ENST00000636964 CABP7Q86V35 215 aa12.9□□□□□ -0.35
CLN6-217ENST00000636964 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.35
CLN6-217ENST00000636964 CD2APQ9Y5K6 639 aa12.9□□□□□ -0.35
CLN6-217ENST00000636964 PRPHP41219 470 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 FBXO11Q86XK2 927 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 KCND1Q9NSA2 647 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 CNOT7Q9UIV1 285 aaKnown RBP12.89□□□□□ -0.35
CLN6-217ENST00000636964 PRR12Q9ULL5 1215 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 PLCG1P19174 1290 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 CAP2P40123 477 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
CLN6-217ENST00000636964 AMNQ9BXJ7 453 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms