RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 BICD2Q8TD16 824 aa12.16□□□□□ -0.46
CLN5-213ENST00000636681 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
CLN5-213ENST00000636681 MMP19Q99542 508 aa12.16□□□□□ -0.46
CLN5-213ENST00000636681 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
CLN5-213ENST00000636681 SPDYE3A6NKU9 549 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 SLC37A4O43826 429 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 SLC25A27O95847 323 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 MCM7P33993 719 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 ARHGAP4P98171 946 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 GRIN1Q05586 938 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 TKFCQ3LXA3 575 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 RMDN3Q96TC7 470 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 RTEL1Q9NZ71 1219 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 FAM86B1E9PN63 330 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 FAM86B2P0C5J1 330 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 MYCLP12524 364 aaPredicted RBP12.15□□□□□ -0.46
CLN5-213ENST00000636681 ADORA2AP29274 412 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
CLN5-213ENST00000636681 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
CLN5-213ENST00000636681 TRAF1Q13077 416 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 PGM5Q15124 567 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 PTPAQ15257 358 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 MROH8Q9H579 483 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 PXMP2Q9NR77 195 aa12.15□□□□□ -0.46
CLN5-213ENST00000636681 WDR81Q562E7 1941 aa12.15□□□□□ -0.47
CLN5-213ENST00000636681 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 DNAJC25-GNG10A0A024R161 153 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
CLN5-213ENST00000636681 GADD45BO75293 160 aaPredicted RBP12.14□□□□□ -0.47
CLN5-213ENST00000636681 FCER1AP12319 257 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 PTGS1P23219 599 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 PTPREP23469 700 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 SREBF1P36956 1147 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 ANO1Q5XXA6 986 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 FAM177A1Q8N128 213 aaPredicted RBP12.14□□□□□ -0.47
CLN5-213ENST00000636681 C4orf32Q8N8J7 132 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 SHCBP1Q8NEM2 672 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 NPLOC4Q8TAT6 608 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
CLN5-213ENST00000636681 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
CLN5-213ENST00000636681 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.14□□□□□ -0.47
CLN5-213ENST00000636681 ZNF236Q9UL36 1845 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 CCNA1P78396 465 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 AP3B2Q13367 1082 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 KCTD2Q14681 263 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 IL17AQ16552 155 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 CCAR1Q8IX12 1150 aaKnown RBP12.13□□□□□ -0.47
CLN5-213ENST00000636681 LEO1Q8WVC0 666 aaPredicted RBP12.13□□□□□ -0.47
CLN5-213ENST00000636681 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 GABRQQ9UN88 632 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 BRCA2P51587 3418 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 FOSP01100 380 aaPredicted RBP12.13□□□□□ -0.47
CLN5-213ENST00000636681 ALDH5A1P51649 535 aaPredicted RBP12.13□□□□□ -0.47
CLN5-213ENST00000636681 PTGDRQ13258 359 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 RILPL1Q5EBL4 403 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 CD99L2Q8TCZ2 262 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 LENG9Q96B70 501 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 GLT8D2Q9H1C3 349 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 FLRT1Q9NZU1 646 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
CLN5-213ENST00000636681 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 SORBS3O60504 671 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 RGS20O76081 388 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 NR3C2P08235 984 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 ARP10275 920 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 PDIA4P13667 645 aaKnown RBP12.12□□□□□ -0.47
CLN5-213ENST00000636681 ITGB5P18084 799 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 PSMC4P43686 418 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 NASPP49321 788 aaPredicted RBP12.12□□□□□ -0.47
CLN5-213ENST00000636681 KRT85P78386 507 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
CLN5-213ENST00000636681 GRB14Q14449 540 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 CCL14Q16627 93 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 ZNF792Q3KQV3 632 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 PRR16Q569H4 304 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 SPECC1Q5M775 1068 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 MORN1Q5T089 497 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLN5-213ENST00000636681 ZNF396Q96N95 335 aaPredicted RBP12.12□□□□□ -0.47
CLN5-213ENST00000636681 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
CLN5-213ENST00000636681 NOL7Q9UMY1 257 aaKnown RBP12.12□□□□□ -0.47
CLN5-213ENST00000636681 TELO2Q9Y4R8 837 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms